Gene : Thecc1EG010550 T. cacao v1.1
Defline:  (1 of 1) PTHR12224//PTHR12224:SF2 - BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  2616
Name:  ? Thecc1EG010550 Secondary Identifier:  ? PAC:27464833
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7426 Theobroma cacao pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010550 0.5kb upstream 0.5kb upstream 3345 true scaffold_2: 34263557-34266901 Theobroma cacao
Thecc1EG010550 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 34263557-34264056 Theobroma cacao
Thecc1EG010550 0.5kb downstream 0.5kb downstream 3345 true scaffold_2: 34264057-34267401 Theobroma cacao
Thecc1EG010550 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 34266902-34267401 Theobroma cacao
Thecc1EG010550 1.0kb upstream 1.0kb upstream 3845 true scaffold_2: 34263057-34266901 Theobroma cacao
Thecc1EG010550 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 34263057-34264056 Theobroma cacao
Thecc1EG010550 1.0kb downstream 1.0kb downstream 3845 true scaffold_2: 34264057-34267901 Theobroma cacao
Thecc1EG010550 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 34266902-34267901 Theobroma cacao
Thecc1EG010550 2.0kb upstream 2.0kb upstream 4845 true scaffold_2: 34262057-34266901 Theobroma cacao
Thecc1EG010550 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 34262057-34264056 Theobroma cacao
Thecc1EG010550 2.0kb downstream 2.0kb downstream 4845 true scaffold_2: 34264057-34268901 Theobroma cacao
Thecc1EG010550 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 34266902-34268901 Theobroma cacao
Thecc1EG010550 5.0kb upstream 5.0kb upstream 7845 true scaffold_2: 34259057-34266901 Theobroma cacao
Thecc1EG010550 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 34259057-34264056 Theobroma cacao
Thecc1EG010550 5.0kb downstream 5.0kb downstream 7845 true scaffold_2: 34264057-34271901 Theobroma cacao
Thecc1EG010550 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 34266902-34271901 Theobroma cacao
Thecc1EG010550 10.0kb upstream 10.0kb upstream 12845 true scaffold_2: 34254057-34266901 Theobroma cacao
Thecc1EG010550 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 34254057-34264056 Theobroma cacao
Thecc1EG010550 10.0kb downstream 10.0kb downstream 12845 true scaffold_2: 34264057-34276901 Theobroma cacao
Thecc1EG010550 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 34266902-34276901 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836858 5264 Brassicales-Malvales View MSA
124342015 5266 SBM View MSA
124239256 5268 Malvidae View MSA
124074833 5270 Rosid View MSA
123745147 5271 Pentapetalae View MSA
122787351 5272 Eudicot View MSA
122044255 5273 Angiosperm View MSA
121351107 5274 Embryophyte View MSA
123424609 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain