Gene : Thecc1EG010433 T. cacao v1.1
Defline:  (1 of 1) PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Genomic Order:  2553
Name:  ? Thecc1EG010433 Secondary Identifier:  ? PAC:27462222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010433 0.5kb upstream 0.5kb upstream 9694 true scaffold_2: 33380134-33389827 Theobroma cacao
Thecc1EG010433 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 33380134-33380633 Theobroma cacao
Thecc1EG010433 0.5kb downstream 0.5kb downstream 9694 true scaffold_2: 33380634-33390327 Theobroma cacao
Thecc1EG010433 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 33389828-33390327 Theobroma cacao
Thecc1EG010433 1.0kb upstream 1.0kb upstream 10194 true scaffold_2: 33379634-33389827 Theobroma cacao
Thecc1EG010433 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 33379634-33380633 Theobroma cacao
Thecc1EG010433 1.0kb downstream 1.0kb downstream 10194 true scaffold_2: 33380634-33390827 Theobroma cacao
Thecc1EG010433 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 33389828-33390827 Theobroma cacao
Thecc1EG010433 2.0kb upstream 2.0kb upstream 11194 true scaffold_2: 33378634-33389827 Theobroma cacao
Thecc1EG010433 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 33378634-33380633 Theobroma cacao
Thecc1EG010433 2.0kb downstream 2.0kb downstream 11194 true scaffold_2: 33380634-33391827 Theobroma cacao
Thecc1EG010433 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 33389828-33391827 Theobroma cacao
Thecc1EG010433 5.0kb upstream 5.0kb upstream 14194 true scaffold_2: 33375634-33389827 Theobroma cacao
Thecc1EG010433 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 33375634-33380633 Theobroma cacao
Thecc1EG010433 5.0kb downstream 5.0kb downstream 14194 true scaffold_2: 33380634-33394827 Theobroma cacao
Thecc1EG010433 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 33389828-33394827 Theobroma cacao
Thecc1EG010433 10.0kb upstream 10.0kb upstream 19194 true scaffold_2: 33370634-33389827 Theobroma cacao
Thecc1EG010433 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 33370634-33380633 Theobroma cacao
Thecc1EG010433 10.0kb downstream 10.0kb downstream 19194 true scaffold_2: 33380634-33399827 Theobroma cacao
Thecc1EG010433 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 33389828-33399827 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833445 5264 Brassicales-Malvales View MSA
124351620 5266 SBM View MSA
124246446 5268 Malvidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain