Gene : Thecc1EG010409 T. cacao v1.1
Defline:  (1 of 2) K03007 - DNA-directed RNA polymerases I, II, and III subunit RPABC5 (RPB10, POLR2L) Genomic Order:  2539
Name:  ? Thecc1EG010409 Secondary Identifier:  ? PAC:27464065
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010409 0.5kb upstream 0.5kb upstream 3509 true scaffold_2: 33230106-33233614 Theobroma cacao
Thecc1EG010409 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 33230106-33230605 Theobroma cacao
Thecc1EG010409 0.5kb downstream 0.5kb downstream 3509 true scaffold_2: 33230606-33234114 Theobroma cacao
Thecc1EG010409 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 33233615-33234114 Theobroma cacao
Thecc1EG010409 1.0kb upstream 1.0kb upstream 4009 true scaffold_2: 33229606-33233614 Theobroma cacao
Thecc1EG010409 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 33229606-33230605 Theobroma cacao
Thecc1EG010409 1.0kb downstream 1.0kb downstream 4009 true scaffold_2: 33230606-33234614 Theobroma cacao
Thecc1EG010409 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 33233615-33234614 Theobroma cacao
Thecc1EG010409 2.0kb upstream 2.0kb upstream 5009 true scaffold_2: 33228606-33233614 Theobroma cacao
Thecc1EG010409 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 33228606-33230605 Theobroma cacao
Thecc1EG010409 2.0kb downstream 2.0kb downstream 5009 true scaffold_2: 33230606-33235614 Theobroma cacao
Thecc1EG010409 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 33233615-33235614 Theobroma cacao
Thecc1EG010409 5.0kb upstream 5.0kb upstream 8009 true scaffold_2: 33225606-33233614 Theobroma cacao
Thecc1EG010409 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 33225606-33230605 Theobroma cacao
Thecc1EG010409 5.0kb downstream 5.0kb downstream 8009 true scaffold_2: 33230606-33238614 Theobroma cacao
Thecc1EG010409 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 33233615-33238614 Theobroma cacao
Thecc1EG010409 10.0kb upstream 10.0kb upstream 13009 true scaffold_2: 33220606-33233614 Theobroma cacao
Thecc1EG010409 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 33220606-33230605 Theobroma cacao
Thecc1EG010409 10.0kb downstream 10.0kb downstream 13009 true scaffold_2: 33230606-33243614 Theobroma cacao
Thecc1EG010409 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 33233615-33243614 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123817706 5264 Brassicales-Malvales Singleton cluster - no MSA
124314048 5266 SBM Singleton cluster - no MSA
124251410 5268 Malvidae View MSA
124064582 5270 Rosid View MSA
123736869 5271 Pentapetalae View MSA
122788474 5272 Eudicot View MSA
122046178 5273 Angiosperm View MSA
121344110 5274 Embryophyte View MSA
123424802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain