Gene : Thecc1EG010389 T. cacao v1.1
Defline:  (1 of 1) PTHR11183//PTHR11183:SF53 - GLYCOGENIN // GALACTINOL SYNTHASE 4-RELATED Genomic Order:  2523
Name:  ? Thecc1EG010389 Secondary Identifier:  ? PAC:27461118
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5337 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010389 0.5kb upstream 0.5kb upstream 2865 true scaffold_2: 33104424-33107288 Theobroma cacao
Thecc1EG010389 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 33106789-33107288 Theobroma cacao
Thecc1EG010389 0.5kb downstream 0.5kb downstream 2865 true scaffold_2: 33103924-33106788 Theobroma cacao
Thecc1EG010389 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 33103924-33104423 Theobroma cacao
Thecc1EG010389 1.0kb upstream 1.0kb upstream 3365 true scaffold_2: 33104424-33107788 Theobroma cacao
Thecc1EG010389 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 33106789-33107788 Theobroma cacao
Thecc1EG010389 1.0kb downstream 1.0kb downstream 3365 true scaffold_2: 33103424-33106788 Theobroma cacao
Thecc1EG010389 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 33103424-33104423 Theobroma cacao
Thecc1EG010389 2.0kb upstream 2.0kb upstream 4365 true scaffold_2: 33104424-33108788 Theobroma cacao
Thecc1EG010389 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 33106789-33108788 Theobroma cacao
Thecc1EG010389 2.0kb downstream 2.0kb downstream 4365 true scaffold_2: 33102424-33106788 Theobroma cacao
Thecc1EG010389 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 33102424-33104423 Theobroma cacao
Thecc1EG010389 5.0kb upstream 5.0kb upstream 7365 true scaffold_2: 33104424-33111788 Theobroma cacao
Thecc1EG010389 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 33106789-33111788 Theobroma cacao
Thecc1EG010389 5.0kb downstream 5.0kb downstream 7365 true scaffold_2: 33099424-33106788 Theobroma cacao
Thecc1EG010389 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 33099424-33104423 Theobroma cacao
Thecc1EG010389 10.0kb upstream 10.0kb upstream 12365 true scaffold_2: 33104424-33116788 Theobroma cacao
Thecc1EG010389 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 33106789-33116788 Theobroma cacao
Thecc1EG010389 10.0kb downstream 10.0kb downstream 12365 true scaffold_2: 33094424-33106788 Theobroma cacao
Thecc1EG010389 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 33094424-33104423 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829089 5264 Brassicales-Malvales View MSA
124338384 5266 SBM View MSA
124242793 5268 Malvidae View MSA
124061289 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain