Gene : Thecc1EG010379 T. cacao v1.1
Defline:  (1 of 6) 3.4.23.50 - Human endogenous retrovirus K endopeptidase / Human retrovirus K10 retropepsin Genomic Order:  2517
Name:  ? Thecc1EG010379 Secondary Identifier:  ? PAC:27464856
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010379 0.5kb upstream 0.5kb upstream 6124 true scaffold_2: 33017347-33023470 Theobroma cacao
Thecc1EG010379 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 33017347-33017846 Theobroma cacao
Thecc1EG010379 0.5kb downstream 0.5kb downstream 6124 true scaffold_2: 33017847-33023970 Theobroma cacao
Thecc1EG010379 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 33023471-33023970 Theobroma cacao
Thecc1EG010379 1.0kb upstream 1.0kb upstream 6624 true scaffold_2: 33016847-33023470 Theobroma cacao
Thecc1EG010379 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 33016847-33017846 Theobroma cacao
Thecc1EG010379 1.0kb downstream 1.0kb downstream 6624 true scaffold_2: 33017847-33024470 Theobroma cacao
Thecc1EG010379 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 33023471-33024470 Theobroma cacao
Thecc1EG010379 2.0kb upstream 2.0kb upstream 7624 true scaffold_2: 33015847-33023470 Theobroma cacao
Thecc1EG010379 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 33015847-33017846 Theobroma cacao
Thecc1EG010379 2.0kb downstream 2.0kb downstream 7624 true scaffold_2: 33017847-33025470 Theobroma cacao
Thecc1EG010379 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 33023471-33025470 Theobroma cacao
Thecc1EG010379 5.0kb upstream 5.0kb upstream 10624 true scaffold_2: 33012847-33023470 Theobroma cacao
Thecc1EG010379 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 33012847-33017846 Theobroma cacao
Thecc1EG010379 5.0kb downstream 5.0kb downstream 10624 true scaffold_2: 33017847-33028470 Theobroma cacao
Thecc1EG010379 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 33023471-33028470 Theobroma cacao
Thecc1EG010379 10.0kb upstream 10.0kb upstream 15624 true scaffold_2: 33007847-33023470 Theobroma cacao
Thecc1EG010379 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 33007847-33017846 Theobroma cacao
Thecc1EG010379 10.0kb downstream 10.0kb downstream 15624 true scaffold_2: 33017847-33033470 Theobroma cacao
Thecc1EG010379 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 33023471-33033470 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028911 5273 Angiosperm View MSA
123823778 5264 Brassicales-Malvales View MSA
124319834 5266 SBM View MSA
124168343 5268 Malvidae View MSA
124074170 5270 Rosid View MSA
123753436 5271 Pentapetalae View MSA
122775104 5272 Eudicot View MSA
121298339 5274 Embryophyte View MSA
123336316 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain