Gene : Thecc1EG010750 T. cacao v1.1
Defline:  (1 of 2) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  2729
Name:  ? Thecc1EG010750 Secondary Identifier:  ? PAC:27460173
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010750 0.5kb upstream 0.5kb upstream 2740 true scaffold_2: 35385945-35388684 Theobroma cacao
Thecc1EG010750 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 35388185-35388684 Theobroma cacao
Thecc1EG010750 0.5kb downstream 0.5kb downstream 2740 true scaffold_2: 35385445-35388184 Theobroma cacao
Thecc1EG010750 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 35385445-35385944 Theobroma cacao
Thecc1EG010750 1.0kb upstream 1.0kb upstream 3240 true scaffold_2: 35385945-35389184 Theobroma cacao
Thecc1EG010750 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 35388185-35389184 Theobroma cacao
Thecc1EG010750 1.0kb downstream 1.0kb downstream 3240 true scaffold_2: 35384945-35388184 Theobroma cacao
Thecc1EG010750 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 35384945-35385944 Theobroma cacao
Thecc1EG010750 2.0kb upstream 2.0kb upstream 4240 true scaffold_2: 35385945-35390184 Theobroma cacao
Thecc1EG010750 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 35388185-35390184 Theobroma cacao
Thecc1EG010750 2.0kb downstream 2.0kb downstream 4240 true scaffold_2: 35383945-35388184 Theobroma cacao
Thecc1EG010750 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 35383945-35385944 Theobroma cacao
Thecc1EG010750 5.0kb upstream 5.0kb upstream 7240 true scaffold_2: 35385945-35393184 Theobroma cacao
Thecc1EG010750 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 35388185-35393184 Theobroma cacao
Thecc1EG010750 5.0kb downstream 5.0kb downstream 7240 true scaffold_2: 35380945-35388184 Theobroma cacao
Thecc1EG010750 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 35380945-35385944 Theobroma cacao
Thecc1EG010750 10.0kb upstream 10.0kb upstream 12240 true scaffold_2: 35385945-35398184 Theobroma cacao
Thecc1EG010750 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 35388185-35398184 Theobroma cacao
Thecc1EG010750 10.0kb downstream 10.0kb downstream 12240 true scaffold_2: 35375945-35388184 Theobroma cacao
Thecc1EG010750 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 35375945-35385944 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833235 5264 Brassicales-Malvales View MSA
124337430 5266 SBM View MSA
124237127 5268 Malvidae View MSA
124064584 5270 Rosid View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain