Gene : Thecc1EG010682 T. cacao v1.1
Defline:  (1 of 1) PTHR13164//PTHR13164:SF7 - CALICYLIN BINDING PROTEIN // COP1-INTERACTING PROTEIN 4-RELATED Genomic Order:  2687
Name:  ? Thecc1EG010682 Secondary Identifier:  ? PAC:27464654
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010682 0.5kb upstream 0.5kb upstream 7101 true scaffold_2: 34921754-34928854 Theobroma cacao
Thecc1EG010682 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 34928355-34928854 Theobroma cacao
Thecc1EG010682 0.5kb downstream 0.5kb downstream 7101 true scaffold_2: 34921254-34928354 Theobroma cacao
Thecc1EG010682 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 34921254-34921753 Theobroma cacao
Thecc1EG010682 1.0kb upstream 1.0kb upstream 7601 true scaffold_2: 34921754-34929354 Theobroma cacao
Thecc1EG010682 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 34928355-34929354 Theobroma cacao
Thecc1EG010682 1.0kb downstream 1.0kb downstream 7601 true scaffold_2: 34920754-34928354 Theobroma cacao
Thecc1EG010682 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 34920754-34921753 Theobroma cacao
Thecc1EG010682 2.0kb upstream 2.0kb upstream 8601 true scaffold_2: 34921754-34930354 Theobroma cacao
Thecc1EG010682 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 34928355-34930354 Theobroma cacao
Thecc1EG010682 2.0kb downstream 2.0kb downstream 8601 true scaffold_2: 34919754-34928354 Theobroma cacao
Thecc1EG010682 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 34919754-34921753 Theobroma cacao
Thecc1EG010682 5.0kb upstream 5.0kb upstream 11601 true scaffold_2: 34921754-34933354 Theobroma cacao
Thecc1EG010682 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 34928355-34933354 Theobroma cacao
Thecc1EG010682 5.0kb downstream 5.0kb downstream 11601 true scaffold_2: 34916754-34928354 Theobroma cacao
Thecc1EG010682 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 34916754-34921753 Theobroma cacao
Thecc1EG010682 10.0kb upstream 10.0kb upstream 16601 true scaffold_2: 34921754-34938354 Theobroma cacao
Thecc1EG010682 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 34928355-34938354 Theobroma cacao
Thecc1EG010682 10.0kb downstream 10.0kb downstream 16601 true scaffold_2: 34911754-34928354 Theobroma cacao
Thecc1EG010682 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 34911754-34921753 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841102 5264 Brassicales-Malvales View MSA
124343739 5266 SBM View MSA
124248012 5268 Malvidae View MSA
124069381 5270 Rosid View MSA
123743976 5271 Pentapetalae View MSA
122793189 5272 Eudicot View MSA
122042859 5273 Angiosperm View MSA
121310036 5274 Embryophyte View MSA
123347639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain