Gene : Thecc1EG010664 T. cacao v1.1

Defline:  (1 of 3) K14398 - cleavage and polyadenylation specificity factor subunit 6/7 (CPSF6_7) Genomic Order:  2675
Name:  ? Thecc1EG010664 Secondary Identifier:  ? PAC:27461870

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010664 0.5kb upstream 0.5kb upstream 56330 true scaffold_2: 34792577-34848906 Theobroma cacao
Thecc1EG010664 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 34792577-34793076 Theobroma cacao
Thecc1EG010664 0.5kb downstream 0.5kb downstream 56330 true scaffold_2: 34793077-34849406 Theobroma cacao
Thecc1EG010664 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 34848907-34849406 Theobroma cacao
Thecc1EG010664 1.0kb upstream 1.0kb upstream 56830 true scaffold_2: 34792077-34848906 Theobroma cacao
Thecc1EG010664 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 34792077-34793076 Theobroma cacao
Thecc1EG010664 1.0kb downstream 1.0kb downstream 56830 true scaffold_2: 34793077-34849906 Theobroma cacao
Thecc1EG010664 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 34848907-34849906 Theobroma cacao
Thecc1EG010664 2.0kb upstream 2.0kb upstream 57830 true scaffold_2: 34791077-34848906 Theobroma cacao
Thecc1EG010664 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 34791077-34793076 Theobroma cacao
Thecc1EG010664 2.0kb downstream 2.0kb downstream 57830 true scaffold_2: 34793077-34850906 Theobroma cacao
Thecc1EG010664 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 34848907-34850906 Theobroma cacao
Thecc1EG010664 5.0kb upstream 5.0kb upstream 60830 true scaffold_2: 34788077-34848906 Theobroma cacao
Thecc1EG010664 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 34788077-34793076 Theobroma cacao
Thecc1EG010664 5.0kb downstream 5.0kb downstream 60830 true scaffold_2: 34793077-34853906 Theobroma cacao
Thecc1EG010664 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 34848907-34853906 Theobroma cacao
Thecc1EG010664 10.0kb upstream 10.0kb upstream 65830 true scaffold_2: 34783077-34848906 Theobroma cacao
Thecc1EG010664 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 34783077-34793076 Theobroma cacao
Thecc1EG010664 10.0kb downstream 10.0kb downstream 65830 true scaffold_2: 34793077-34858906 Theobroma cacao
Thecc1EG010664 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 34848907-34858906 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831687 5264 Brassicales-Malvales View MSA
124350571 5266 SBM View MSA
124251712 5268 Malvidae View MSA
124074080 5270 Rosid View MSA
123752674 5271 Pentapetalae View MSA
122796288 5272 Eudicot View MSA
122042872 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349327 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain