Gene : Thecc1EG010631 T. cacao v1.1

Defline:  (1 of 1) K18723 - nucleoporin GLE1 (GLE1) Genomic Order:  2654
Name:  ? Thecc1EG010631 Secondary Identifier:  ? PAC:27460164

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010631 0.5kb upstream 0.5kb upstream 23352 true scaffold_2: 34560111-34583462 Theobroma cacao
Thecc1EG010631 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 34582963-34583462 Theobroma cacao
Thecc1EG010631 0.5kb downstream 0.5kb downstream 23352 true scaffold_2: 34559611-34582962 Theobroma cacao
Thecc1EG010631 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 34559611-34560110 Theobroma cacao
Thecc1EG010631 1.0kb upstream 1.0kb upstream 23852 true scaffold_2: 34560111-34583962 Theobroma cacao
Thecc1EG010631 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 34582963-34583962 Theobroma cacao
Thecc1EG010631 1.0kb downstream 1.0kb downstream 23852 true scaffold_2: 34559111-34582962 Theobroma cacao
Thecc1EG010631 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 34559111-34560110 Theobroma cacao
Thecc1EG010631 2.0kb upstream 2.0kb upstream 24852 true scaffold_2: 34560111-34584962 Theobroma cacao
Thecc1EG010631 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 34582963-34584962 Theobroma cacao
Thecc1EG010631 2.0kb downstream 2.0kb downstream 24852 true scaffold_2: 34558111-34582962 Theobroma cacao
Thecc1EG010631 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 34558111-34560110 Theobroma cacao
Thecc1EG010631 5.0kb upstream 5.0kb upstream 27852 true scaffold_2: 34560111-34587962 Theobroma cacao
Thecc1EG010631 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 34582963-34587962 Theobroma cacao
Thecc1EG010631 5.0kb downstream 5.0kb downstream 27852 true scaffold_2: 34555111-34582962 Theobroma cacao
Thecc1EG010631 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 34555111-34560110 Theobroma cacao
Thecc1EG010631 10.0kb upstream 10.0kb upstream 32852 true scaffold_2: 34560111-34592962 Theobroma cacao
Thecc1EG010631 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 34582963-34592962 Theobroma cacao
Thecc1EG010631 10.0kb downstream 10.0kb downstream 32852 true scaffold_2: 34550111-34582962 Theobroma cacao
Thecc1EG010631 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 34550111-34560110 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829473 5264 Brassicales-Malvales View MSA
124344209 5266 SBM View MSA
124241264 5268 Malvidae View MSA
124065285 5270 Rosid View MSA
123740284 5271 Pentapetalae View MSA
122790886 5272 Eudicot View MSA
122045266 5273 Angiosperm View MSA
121346292 5274 Embryophyte View MSA
123425199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain