Gene : Thecc1EG010623 T. cacao v1.1

Defline:  (1 of 1) PTHR34937//PTHR34937:SF1 - FAMILY NOT NAMED // MYOSIN HEAVY CHAIN-RELATED Genomic Order:  2649
Name:  ? Thecc1EG010623 Secondary Identifier:  ? PAC:27462095

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010623 0.5kb upstream 0.5kb upstream 5458 true scaffold_2: 34518271-34523728 Theobroma cacao
Thecc1EG010623 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 34523229-34523728 Theobroma cacao
Thecc1EG010623 0.5kb downstream 0.5kb downstream 5458 true scaffold_2: 34517771-34523228 Theobroma cacao
Thecc1EG010623 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 34517771-34518270 Theobroma cacao
Thecc1EG010623 1.0kb upstream 1.0kb upstream 5958 true scaffold_2: 34518271-34524228 Theobroma cacao
Thecc1EG010623 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 34523229-34524228 Theobroma cacao
Thecc1EG010623 1.0kb downstream 1.0kb downstream 5958 true scaffold_2: 34517271-34523228 Theobroma cacao
Thecc1EG010623 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 34517271-34518270 Theobroma cacao
Thecc1EG010623 2.0kb upstream 2.0kb upstream 6958 true scaffold_2: 34518271-34525228 Theobroma cacao
Thecc1EG010623 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 34523229-34525228 Theobroma cacao
Thecc1EG010623 2.0kb downstream 2.0kb downstream 6958 true scaffold_2: 34516271-34523228 Theobroma cacao
Thecc1EG010623 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 34516271-34518270 Theobroma cacao
Thecc1EG010623 5.0kb upstream 5.0kb upstream 9958 true scaffold_2: 34518271-34528228 Theobroma cacao
Thecc1EG010623 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 34523229-34528228 Theobroma cacao
Thecc1EG010623 5.0kb downstream 5.0kb downstream 9958 true scaffold_2: 34513271-34523228 Theobroma cacao
Thecc1EG010623 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 34513271-34518270 Theobroma cacao
Thecc1EG010623 10.0kb upstream 10.0kb upstream 14958 true scaffold_2: 34518271-34533228 Theobroma cacao
Thecc1EG010623 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 34523229-34533228 Theobroma cacao
Thecc1EG010623 10.0kb downstream 10.0kb downstream 14958 true scaffold_2: 34508271-34523228 Theobroma cacao
Thecc1EG010623 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 34508271-34518270 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831902 5264 Brassicales-Malvales View MSA
124342223 5266 SBM View MSA
124241204 5268 Malvidae View MSA
124061666 5270 Rosid View MSA
123740246 5271 Pentapetalae View MSA
122790533 5272 Eudicot View MSA
122044553 5273 Angiosperm View MSA
121345733 5274 Embryophyte View MSA
123380261 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain