Gene : Thecc1EG010879 T. cacao v1.1
Defline:  (1 of 1) PTHR10285:SF53 - URIDINE KINASE Genomic Order:  2824
Name:  ? Thecc1EG010879 Secondary Identifier:  ? PAC:27459637
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7193 Theobroma cacao pathologic  
Tcacao PWY-7196 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010879 0.5kb upstream 0.5kb upstream 23222 true scaffold_2: 36241635-36264856 Theobroma cacao
Thecc1EG010879 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 36241635-36242134 Theobroma cacao
Thecc1EG010879 0.5kb downstream 0.5kb downstream 23222 true scaffold_2: 36242135-36265356 Theobroma cacao
Thecc1EG010879 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 36264857-36265356 Theobroma cacao
Thecc1EG010879 1.0kb upstream 1.0kb upstream 23722 true scaffold_2: 36241135-36264856 Theobroma cacao
Thecc1EG010879 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 36241135-36242134 Theobroma cacao
Thecc1EG010879 1.0kb downstream 1.0kb downstream 23722 true scaffold_2: 36242135-36265856 Theobroma cacao
Thecc1EG010879 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 36264857-36265856 Theobroma cacao
Thecc1EG010879 2.0kb upstream 2.0kb upstream 24722 true scaffold_2: 36240135-36264856 Theobroma cacao
Thecc1EG010879 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 36240135-36242134 Theobroma cacao
Thecc1EG010879 2.0kb downstream 2.0kb downstream 24722 true scaffold_2: 36242135-36266856 Theobroma cacao
Thecc1EG010879 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 36264857-36266856 Theobroma cacao
Thecc1EG010879 5.0kb upstream 5.0kb upstream 27722 true scaffold_2: 36237135-36264856 Theobroma cacao
Thecc1EG010879 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 36237135-36242134 Theobroma cacao
Thecc1EG010879 5.0kb downstream 5.0kb downstream 27722 true scaffold_2: 36242135-36269856 Theobroma cacao
Thecc1EG010879 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 36264857-36269856 Theobroma cacao
Thecc1EG010879 10.0kb upstream 10.0kb upstream 32722 true scaffold_2: 36232135-36264856 Theobroma cacao
Thecc1EG010879 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 36232135-36242134 Theobroma cacao
Thecc1EG010879 10.0kb downstream 10.0kb downstream 32722 true scaffold_2: 36242135-36274856 Theobroma cacao
Thecc1EG010879 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 36264857-36274856 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834288 5264 Brassicales-Malvales View MSA
124339414 5266 SBM View MSA
124241598 5268 Malvidae View MSA
124067943 5270 Rosid View MSA
123741616 5271 Pentapetalae View MSA
122787243 5272 Eudicot View MSA
122044880 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain