Gene : Thecc1EG010857 T. cacao v1.1
Defline:  (1 of 5) PF08450 - SMP-30/Gluconolaconase/LRE-like region (SGL) Genomic Order:  2808
Name:  ? Thecc1EG010857 Secondary Identifier:  ? PAC:27463447
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010857 0.5kb upstream 0.5kb upstream 2426 true scaffold_2: 36082980-36085405 Theobroma cacao
Thecc1EG010857 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 36084906-36085405 Theobroma cacao
Thecc1EG010857 0.5kb downstream 0.5kb downstream 2426 true scaffold_2: 36082480-36084905 Theobroma cacao
Thecc1EG010857 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 36082480-36082979 Theobroma cacao
Thecc1EG010857 1.0kb upstream 1.0kb upstream 2926 true scaffold_2: 36082980-36085905 Theobroma cacao
Thecc1EG010857 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 36084906-36085905 Theobroma cacao
Thecc1EG010857 1.0kb downstream 1.0kb downstream 2926 true scaffold_2: 36081980-36084905 Theobroma cacao
Thecc1EG010857 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 36081980-36082979 Theobroma cacao
Thecc1EG010857 2.0kb upstream 2.0kb upstream 3926 true scaffold_2: 36082980-36086905 Theobroma cacao
Thecc1EG010857 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 36084906-36086905 Theobroma cacao
Thecc1EG010857 2.0kb downstream 2.0kb downstream 3926 true scaffold_2: 36080980-36084905 Theobroma cacao
Thecc1EG010857 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 36080980-36082979 Theobroma cacao
Thecc1EG010857 5.0kb upstream 5.0kb upstream 6926 true scaffold_2: 36082980-36089905 Theobroma cacao
Thecc1EG010857 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 36084906-36089905 Theobroma cacao
Thecc1EG010857 5.0kb downstream 5.0kb downstream 6926 true scaffold_2: 36077980-36084905 Theobroma cacao
Thecc1EG010857 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 36077980-36082979 Theobroma cacao
Thecc1EG010857 10.0kb upstream 10.0kb upstream 11926 true scaffold_2: 36082980-36094905 Theobroma cacao
Thecc1EG010857 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 36084906-36094905 Theobroma cacao
Thecc1EG010857 10.0kb downstream 10.0kb downstream 11926 true scaffold_2: 36072980-36084905 Theobroma cacao
Thecc1EG010857 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 36072980-36082979 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044501 5273 Angiosperm View MSA
123833385 5264 Brassicales-Malvales View MSA
124337774 5266 SBM View MSA
124240434 5268 Malvidae View MSA
124068062 5270 Rosid View MSA
123740610 5271 Pentapetalae View MSA
122787010 5272 Eudicot View MSA
121351602 5274 Embryophyte View MSA
123382243 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain