Gene : Thecc1EG010824 T. cacao v1.1
Defline:  (1 of 5) PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2788
Name:  ? Thecc1EG010824 Secondary Identifier:  ? PAC:27461517
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010824 0.5kb upstream 0.5kb upstream 3415 true scaffold_2: 35841290-35844704 Theobroma cacao
Thecc1EG010824 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 35841290-35841789 Theobroma cacao
Thecc1EG010824 0.5kb downstream 0.5kb downstream 3415 true scaffold_2: 35841790-35845204 Theobroma cacao
Thecc1EG010824 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 35844705-35845204 Theobroma cacao
Thecc1EG010824 1.0kb upstream 1.0kb upstream 3915 true scaffold_2: 35840790-35844704 Theobroma cacao
Thecc1EG010824 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 35840790-35841789 Theobroma cacao
Thecc1EG010824 1.0kb downstream 1.0kb downstream 3915 true scaffold_2: 35841790-35845704 Theobroma cacao
Thecc1EG010824 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 35844705-35845704 Theobroma cacao
Thecc1EG010824 2.0kb upstream 2.0kb upstream 4915 true scaffold_2: 35839790-35844704 Theobroma cacao
Thecc1EG010824 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 35839790-35841789 Theobroma cacao
Thecc1EG010824 2.0kb downstream 2.0kb downstream 4915 true scaffold_2: 35841790-35846704 Theobroma cacao
Thecc1EG010824 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 35844705-35846704 Theobroma cacao
Thecc1EG010824 5.0kb upstream 5.0kb upstream 7915 true scaffold_2: 35836790-35844704 Theobroma cacao
Thecc1EG010824 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 35836790-35841789 Theobroma cacao
Thecc1EG010824 5.0kb downstream 5.0kb downstream 7915 true scaffold_2: 35841790-35849704 Theobroma cacao
Thecc1EG010824 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 35844705-35849704 Theobroma cacao
Thecc1EG010824 10.0kb upstream 10.0kb upstream 12915 true scaffold_2: 35831790-35844704 Theobroma cacao
Thecc1EG010824 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 35831790-35841789 Theobroma cacao
Thecc1EG010824 10.0kb downstream 10.0kb downstream 12915 true scaffold_2: 35841790-35854704 Theobroma cacao
Thecc1EG010824 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 35844705-35854704 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831875 5264 Brassicales-Malvales View MSA
124342962 5266 SBM View MSA
124240747 5268 Malvidae View MSA
124063313 5270 Rosid View MSA
123738652 5271 Pentapetalae View MSA
122793005 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain