Gene : Thecc1EG010811 T. cacao v1.1
Defline:  (1 of 2) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Genomic Order:  2778
Name:  ? Thecc1EG010811 Secondary Identifier:  ? PAC:27460625
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010811 0.5kb upstream 0.5kb upstream 5252 true scaffold_2: 35759796-35765047 Theobroma cacao
Thecc1EG010811 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 35764548-35765047 Theobroma cacao
Thecc1EG010811 0.5kb downstream 0.5kb downstream 5252 true scaffold_2: 35759296-35764547 Theobroma cacao
Thecc1EG010811 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 35759296-35759795 Theobroma cacao
Thecc1EG010811 1.0kb upstream 1.0kb upstream 5752 true scaffold_2: 35759796-35765547 Theobroma cacao
Thecc1EG010811 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 35764548-35765547 Theobroma cacao
Thecc1EG010811 1.0kb downstream 1.0kb downstream 5752 true scaffold_2: 35758796-35764547 Theobroma cacao
Thecc1EG010811 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 35758796-35759795 Theobroma cacao
Thecc1EG010811 2.0kb upstream 2.0kb upstream 6752 true scaffold_2: 35759796-35766547 Theobroma cacao
Thecc1EG010811 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 35764548-35766547 Theobroma cacao
Thecc1EG010811 2.0kb downstream 2.0kb downstream 6752 true scaffold_2: 35757796-35764547 Theobroma cacao
Thecc1EG010811 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 35757796-35759795 Theobroma cacao
Thecc1EG010811 5.0kb upstream 5.0kb upstream 9752 true scaffold_2: 35759796-35769547 Theobroma cacao
Thecc1EG010811 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 35764548-35769547 Theobroma cacao
Thecc1EG010811 5.0kb downstream 5.0kb downstream 9752 true scaffold_2: 35754796-35764547 Theobroma cacao
Thecc1EG010811 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 35754796-35759795 Theobroma cacao
Thecc1EG010811 10.0kb upstream 10.0kb upstream 14752 true scaffold_2: 35759796-35774547 Theobroma cacao
Thecc1EG010811 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 35764548-35774547 Theobroma cacao
Thecc1EG010811 10.0kb downstream 10.0kb downstream 14752 true scaffold_2: 35749796-35764547 Theobroma cacao
Thecc1EG010811 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 35749796-35759795 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041328 5273 Angiosperm View MSA
123835884 5264 Brassicales-Malvales View MSA
124347757 5266 SBM View MSA
124250999 5268 Malvidae View MSA
124072667 5270 Rosid View MSA
123750896 5271 Pentapetalae View MSA
122789616 5272 Eudicot View MSA
121309830 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain