Gene : Thecc1EG010775 T. cacao v1.1
Defline:  (1 of 1) PTHR11771//PTHR11771:SF60 - LIPOXYGENASE // LIPOXYGENASE 6, CHLOROPLASTIC Genomic Order:  2751
Name:  ? Thecc1EG010775 Secondary Identifier:  ? PAC:27460660
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5409 Theobroma cacao pathologic  
Tcacao PWY-5410 Theobroma cacao pathologic  
Tcacao PWY-735 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010775 0.5kb upstream 0.5kb upstream 7255 true scaffold_2: 35522542-35529796 Theobroma cacao
Thecc1EG010775 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 35529297-35529796 Theobroma cacao
Thecc1EG010775 0.5kb downstream 0.5kb downstream 7255 true scaffold_2: 35522042-35529296 Theobroma cacao
Thecc1EG010775 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 35522042-35522541 Theobroma cacao
Thecc1EG010775 1.0kb upstream 1.0kb upstream 7755 true scaffold_2: 35522542-35530296 Theobroma cacao
Thecc1EG010775 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 35529297-35530296 Theobroma cacao
Thecc1EG010775 1.0kb downstream 1.0kb downstream 7755 true scaffold_2: 35521542-35529296 Theobroma cacao
Thecc1EG010775 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 35521542-35522541 Theobroma cacao
Thecc1EG010775 2.0kb upstream 2.0kb upstream 8755 true scaffold_2: 35522542-35531296 Theobroma cacao
Thecc1EG010775 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 35529297-35531296 Theobroma cacao
Thecc1EG010775 2.0kb downstream 2.0kb downstream 8755 true scaffold_2: 35520542-35529296 Theobroma cacao
Thecc1EG010775 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 35520542-35522541 Theobroma cacao
Thecc1EG010775 5.0kb upstream 5.0kb upstream 11755 true scaffold_2: 35522542-35534296 Theobroma cacao
Thecc1EG010775 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 35529297-35534296 Theobroma cacao
Thecc1EG010775 5.0kb downstream 5.0kb downstream 11755 true scaffold_2: 35517542-35529296 Theobroma cacao
Thecc1EG010775 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 35517542-35522541 Theobroma cacao
Thecc1EG010775 10.0kb upstream 10.0kb upstream 16755 true scaffold_2: 35522542-35539296 Theobroma cacao
Thecc1EG010775 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 35529297-35539296 Theobroma cacao
Thecc1EG010775 10.0kb downstream 10.0kb downstream 16755 true scaffold_2: 35512542-35529296 Theobroma cacao
Thecc1EG010775 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 35512542-35522541 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839661 5264 Brassicales-Malvales View MSA
124340250 5266 SBM View MSA
124236928 5268 Malvidae View MSA
124068489 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain