Gene : Thecc1EG011021 T. cacao v1.1

Defline:  (1 of 1) PTHR12701:SF12 - GB|AAF26109.1 Genomic Order:  2902
Name:  ? Thecc1EG011021 Secondary Identifier:  ? PAC:27460012

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011021 0.5kb upstream 0.5kb upstream 1768 true scaffold_2: 37414023-37415790 Theobroma cacao
Thecc1EG011021 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 37415291-37415790 Theobroma cacao
Thecc1EG011021 0.5kb downstream 0.5kb downstream 1768 true scaffold_2: 37413523-37415290 Theobroma cacao
Thecc1EG011021 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 37413523-37414022 Theobroma cacao
Thecc1EG011021 1.0kb upstream 1.0kb upstream 2268 true scaffold_2: 37414023-37416290 Theobroma cacao
Thecc1EG011021 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 37415291-37416290 Theobroma cacao
Thecc1EG011021 1.0kb downstream 1.0kb downstream 2268 true scaffold_2: 37413023-37415290 Theobroma cacao
Thecc1EG011021 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 37413023-37414022 Theobroma cacao
Thecc1EG011021 2.0kb upstream 2.0kb upstream 3268 true scaffold_2: 37414023-37417290 Theobroma cacao
Thecc1EG011021 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 37415291-37417290 Theobroma cacao
Thecc1EG011021 2.0kb downstream 2.0kb downstream 3268 true scaffold_2: 37412023-37415290 Theobroma cacao
Thecc1EG011021 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 37412023-37414022 Theobroma cacao
Thecc1EG011021 5.0kb upstream 5.0kb upstream 6268 true scaffold_2: 37414023-37420290 Theobroma cacao
Thecc1EG011021 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 37415291-37420290 Theobroma cacao
Thecc1EG011021 5.0kb downstream 5.0kb downstream 6268 true scaffold_2: 37409023-37415290 Theobroma cacao
Thecc1EG011021 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 37409023-37414022 Theobroma cacao
Thecc1EG011021 10.0kb upstream 10.0kb upstream 11268 true scaffold_2: 37414023-37425290 Theobroma cacao
Thecc1EG011021 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 37415291-37425290 Theobroma cacao
Thecc1EG011021 10.0kb downstream 10.0kb downstream 11268 true scaffold_2: 37404023-37415290 Theobroma cacao
Thecc1EG011021 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 37404023-37414022 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041316 5273 Angiosperm View MSA
123835766 5264 Brassicales-Malvales View MSA
124337017 5266 SBM View MSA
124239124 5268 Malvidae View MSA
124062686 5270 Rosid View MSA
123746776 5271 Pentapetalae View MSA
122788736 5272 Eudicot View MSA
121348812 5274 Embryophyte View MSA
123381026 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain