Gene : Thecc1EG011280 T. cacao v1.1
Defline:  (1 of 5) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase Genomic Order:  3082
Name:  ? Thecc1EG011280 Secondary Identifier:  ? PAC:27460256
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011280 0.5kb upstream 0.5kb upstream 2359 true scaffold_2: 39165736-39168094 Theobroma cacao
Thecc1EG011280 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39165736-39166235 Theobroma cacao
Thecc1EG011280 0.5kb downstream 0.5kb downstream 2359 true scaffold_2: 39166236-39168594 Theobroma cacao
Thecc1EG011280 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39168095-39168594 Theobroma cacao
Thecc1EG011280 1.0kb upstream 1.0kb upstream 2859 true scaffold_2: 39165236-39168094 Theobroma cacao
Thecc1EG011280 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39165236-39166235 Theobroma cacao
Thecc1EG011280 1.0kb downstream 1.0kb downstream 2859 true scaffold_2: 39166236-39169094 Theobroma cacao
Thecc1EG011280 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39168095-39169094 Theobroma cacao
Thecc1EG011280 2.0kb upstream 2.0kb upstream 3859 true scaffold_2: 39164236-39168094 Theobroma cacao
Thecc1EG011280 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39164236-39166235 Theobroma cacao
Thecc1EG011280 2.0kb downstream 2.0kb downstream 3859 true scaffold_2: 39166236-39170094 Theobroma cacao
Thecc1EG011280 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39168095-39170094 Theobroma cacao
Thecc1EG011280 5.0kb upstream 5.0kb upstream 6859 true scaffold_2: 39161236-39168094 Theobroma cacao
Thecc1EG011280 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39161236-39166235 Theobroma cacao
Thecc1EG011280 5.0kb downstream 5.0kb downstream 6859 true scaffold_2: 39166236-39173094 Theobroma cacao
Thecc1EG011280 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39168095-39173094 Theobroma cacao
Thecc1EG011280 10.0kb upstream 10.0kb upstream 11859 true scaffold_2: 39156236-39168094 Theobroma cacao
Thecc1EG011280 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39156236-39166235 Theobroma cacao
Thecc1EG011280 10.0kb downstream 10.0kb downstream 11859 true scaffold_2: 39166236-39178094 Theobroma cacao
Thecc1EG011280 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39168095-39178094 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779201 5273 Angiosperm View MSA
123838295 5264 Brassicales-Malvales View MSA
124322431 5266 SBM View MSA
124247989 5268 Malvidae View MSA
124066642 5270 Rosid View MSA
123738230 5271 Pentapetalae View MSA
122769915 5272 Eudicot View MSA
121050882 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain