Gene : Thecc1EG011263 T. cacao v1.1
Defline:  (1 of 12) PTHR27004//PTHR27004:SF21 - FAMILY NOT NAMED // DISEASE RESISTANCE-LIKE PROTEIN/LRR DOMAIN-CONTAINING PROTEIN Genomic Order:  3068
Name:  ? Thecc1EG011263 Secondary Identifier:  ? PAC:27462774
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011263 0.5kb upstream 0.5kb upstream 4423 true scaffold_2: 39092276-39096698 Theobroma cacao
Thecc1EG011263 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39092276-39092775 Theobroma cacao
Thecc1EG011263 0.5kb downstream 0.5kb downstream 4423 true scaffold_2: 39092776-39097198 Theobroma cacao
Thecc1EG011263 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39096699-39097198 Theobroma cacao
Thecc1EG011263 1.0kb upstream 1.0kb upstream 4923 true scaffold_2: 39091776-39096698 Theobroma cacao
Thecc1EG011263 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39091776-39092775 Theobroma cacao
Thecc1EG011263 1.0kb downstream 1.0kb downstream 4923 true scaffold_2: 39092776-39097698 Theobroma cacao
Thecc1EG011263 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39096699-39097698 Theobroma cacao
Thecc1EG011263 2.0kb upstream 2.0kb upstream 5923 true scaffold_2: 39090776-39096698 Theobroma cacao
Thecc1EG011263 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39090776-39092775 Theobroma cacao
Thecc1EG011263 2.0kb downstream 2.0kb downstream 5923 true scaffold_2: 39092776-39098698 Theobroma cacao
Thecc1EG011263 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39096699-39098698 Theobroma cacao
Thecc1EG011263 5.0kb upstream 5.0kb upstream 8923 true scaffold_2: 39087776-39096698 Theobroma cacao
Thecc1EG011263 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39087776-39092775 Theobroma cacao
Thecc1EG011263 5.0kb downstream 5.0kb downstream 8923 true scaffold_2: 39092776-39101698 Theobroma cacao
Thecc1EG011263 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39096699-39101698 Theobroma cacao
Thecc1EG011263 10.0kb upstream 10.0kb upstream 13923 true scaffold_2: 39082776-39096698 Theobroma cacao
Thecc1EG011263 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39082776-39092775 Theobroma cacao
Thecc1EG011263 10.0kb downstream 10.0kb downstream 13923 true scaffold_2: 39092776-39106698 Theobroma cacao
Thecc1EG011263 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39096699-39106698 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123817440 5264 Brassicales-Malvales Singleton cluster - no MSA
124313791 5266 SBM Singleton cluster - no MSA
124248863 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain