Gene : Thecc1EG011172 T. cacao v1.1
Defline:  (1 of 1) PTHR24322:SF510 - ALCOHOL DEHYDROGENASE (ATA1) Genomic Order:  3000
Name:  ? Thecc1EG011172 Secondary Identifier:  ? PAC:27460809
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-695 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011172 0.5kb upstream 0.5kb upstream 2215 true scaffold_2: 38393405-38395619 Theobroma cacao
Thecc1EG011172 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 38393405-38393904 Theobroma cacao
Thecc1EG011172 0.5kb downstream 0.5kb downstream 2215 true scaffold_2: 38393905-38396119 Theobroma cacao
Thecc1EG011172 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 38395620-38396119 Theobroma cacao
Thecc1EG011172 1.0kb upstream 1.0kb upstream 2715 true scaffold_2: 38392905-38395619 Theobroma cacao
Thecc1EG011172 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 38392905-38393904 Theobroma cacao
Thecc1EG011172 1.0kb downstream 1.0kb downstream 2715 true scaffold_2: 38393905-38396619 Theobroma cacao
Thecc1EG011172 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 38395620-38396619 Theobroma cacao
Thecc1EG011172 2.0kb upstream 2.0kb upstream 3715 true scaffold_2: 38391905-38395619 Theobroma cacao
Thecc1EG011172 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 38391905-38393904 Theobroma cacao
Thecc1EG011172 2.0kb downstream 2.0kb downstream 3715 true scaffold_2: 38393905-38397619 Theobroma cacao
Thecc1EG011172 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 38395620-38397619 Theobroma cacao
Thecc1EG011172 5.0kb upstream 5.0kb upstream 6715 true scaffold_2: 38388905-38395619 Theobroma cacao
Thecc1EG011172 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 38388905-38393904 Theobroma cacao
Thecc1EG011172 5.0kb downstream 5.0kb downstream 6715 true scaffold_2: 38393905-38400619 Theobroma cacao
Thecc1EG011172 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 38395620-38400619 Theobroma cacao
Thecc1EG011172 10.0kb upstream 10.0kb upstream 11715 true scaffold_2: 38383905-38395619 Theobroma cacao
Thecc1EG011172 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 38383905-38393904 Theobroma cacao
Thecc1EG011172 10.0kb downstream 10.0kb downstream 11715 true scaffold_2: 38393905-38405619 Theobroma cacao
Thecc1EG011172 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 38395620-38405619 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827401 5264 Brassicales-Malvales View MSA
124342614 5266 SBM View MSA
124239258 5268 Malvidae View MSA
124061755 5270 Rosid View MSA
123748267 5271 Pentapetalae View MSA
122788265 5272 Eudicot View MSA
122042997 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain