Gene : Thecc1EG011170 T. cacao v1.1
Defline:  (1 of 1) K03963 - NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7 (NDUFB7) Genomic Order:  2998
Name:  ? Thecc1EG011170 Secondary Identifier:  ? PAC:27464159
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3781 Theobroma cacao pathologic  
Tcacao PWY-4302 Theobroma cacao pathologic  
Tcacao PWY-5083 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011170 0.5kb upstream 0.5kb upstream 4240 true scaffold_2: 38388920-38393159 Theobroma cacao
Thecc1EG011170 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 38392660-38393159 Theobroma cacao
Thecc1EG011170 0.5kb downstream 0.5kb downstream 4240 true scaffold_2: 38388420-38392659 Theobroma cacao
Thecc1EG011170 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 38388420-38388919 Theobroma cacao
Thecc1EG011170 1.0kb upstream 1.0kb upstream 4740 true scaffold_2: 38388920-38393659 Theobroma cacao
Thecc1EG011170 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 38392660-38393659 Theobroma cacao
Thecc1EG011170 1.0kb downstream 1.0kb downstream 4740 true scaffold_2: 38387920-38392659 Theobroma cacao
Thecc1EG011170 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 38387920-38388919 Theobroma cacao
Thecc1EG011170 2.0kb upstream 2.0kb upstream 5740 true scaffold_2: 38388920-38394659 Theobroma cacao
Thecc1EG011170 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 38392660-38394659 Theobroma cacao
Thecc1EG011170 2.0kb downstream 2.0kb downstream 5740 true scaffold_2: 38386920-38392659 Theobroma cacao
Thecc1EG011170 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 38386920-38388919 Theobroma cacao
Thecc1EG011170 5.0kb upstream 5.0kb upstream 8740 true scaffold_2: 38388920-38397659 Theobroma cacao
Thecc1EG011170 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 38392660-38397659 Theobroma cacao
Thecc1EG011170 5.0kb downstream 5.0kb downstream 8740 true scaffold_2: 38383920-38392659 Theobroma cacao
Thecc1EG011170 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 38383920-38388919 Theobroma cacao
Thecc1EG011170 10.0kb upstream 10.0kb upstream 13740 true scaffold_2: 38388920-38402659 Theobroma cacao
Thecc1EG011170 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 38392660-38402659 Theobroma cacao
Thecc1EG011170 10.0kb downstream 10.0kb downstream 13740 true scaffold_2: 38378920-38392659 Theobroma cacao
Thecc1EG011170 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 38378920-38388919 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829636 5264 Brassicales-Malvales View MSA
124339782 5266 SBM View MSA
124248818 5268 Malvidae View MSA
124065208 5270 Rosid View MSA
123736664 5271 Pentapetalae View MSA
122789933 5272 Eudicot View MSA
122042996 5273 Angiosperm View MSA
121349349 5274 Embryophyte View MSA
123428564 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain