Gene : Thecc1EG011176 T. cacao v1.1

Defline:  Uncharacterized protein (62%P) Genomic Order:  3004
Name:  ? Thecc1EG011176 Secondary Identifier:  ? PAC:27462315

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011176 0.5kb upstream 0.5kb upstream 2480 true scaffold_2: 38417146-38419625 Theobroma cacao
Thecc1EG011176 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 38417146-38417645 Theobroma cacao
Thecc1EG011176 0.5kb downstream 0.5kb downstream 2480 true scaffold_2: 38417646-38420125 Theobroma cacao
Thecc1EG011176 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 38419626-38420125 Theobroma cacao
Thecc1EG011176 1.0kb upstream 1.0kb upstream 2980 true scaffold_2: 38416646-38419625 Theobroma cacao
Thecc1EG011176 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 38416646-38417645 Theobroma cacao
Thecc1EG011176 1.0kb downstream 1.0kb downstream 2980 true scaffold_2: 38417646-38420625 Theobroma cacao
Thecc1EG011176 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 38419626-38420625 Theobroma cacao
Thecc1EG011176 2.0kb upstream 2.0kb upstream 3980 true scaffold_2: 38415646-38419625 Theobroma cacao
Thecc1EG011176 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 38415646-38417645 Theobroma cacao
Thecc1EG011176 2.0kb downstream 2.0kb downstream 3980 true scaffold_2: 38417646-38421625 Theobroma cacao
Thecc1EG011176 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 38419626-38421625 Theobroma cacao
Thecc1EG011176 5.0kb upstream 5.0kb upstream 6980 true scaffold_2: 38412646-38419625 Theobroma cacao
Thecc1EG011176 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 38412646-38417645 Theobroma cacao
Thecc1EG011176 5.0kb downstream 5.0kb downstream 6980 true scaffold_2: 38417646-38424625 Theobroma cacao
Thecc1EG011176 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 38419626-38424625 Theobroma cacao
Thecc1EG011176 10.0kb upstream 10.0kb upstream 11980 true scaffold_2: 38407646-38419625 Theobroma cacao
Thecc1EG011176 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 38407646-38417645 Theobroma cacao
Thecc1EG011176 10.0kb downstream 10.0kb downstream 11980 true scaffold_2: 38417646-38429625 Theobroma cacao
Thecc1EG011176 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 38419626-38429625 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829558 5264 Brassicales-Malvales View MSA
124340290 5266 SBM View MSA
124242449 5268 Malvidae View MSA
124069891 5270 Rosid View MSA
123747205 5271 Pentapetalae View MSA
122796968 5272 Eudicot View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain