Gene : Thecc1EG011390 T. cacao v1.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF133 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3181
Name:  ? Thecc1EG011390 Secondary Identifier:  ? PAC:27463212
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011390 0.5kb upstream 0.5kb upstream 1464 true scaffold_2: 39834495-39835958 Theobroma cacao
Thecc1EG011390 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39835459-39835958 Theobroma cacao
Thecc1EG011390 0.5kb downstream 0.5kb downstream 1464 true scaffold_2: 39833995-39835458 Theobroma cacao
Thecc1EG011390 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39833995-39834494 Theobroma cacao
Thecc1EG011390 1.0kb upstream 1.0kb upstream 1964 true scaffold_2: 39834495-39836458 Theobroma cacao
Thecc1EG011390 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39835459-39836458 Theobroma cacao
Thecc1EG011390 1.0kb downstream 1.0kb downstream 1964 true scaffold_2: 39833495-39835458 Theobroma cacao
Thecc1EG011390 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39833495-39834494 Theobroma cacao
Thecc1EG011390 2.0kb upstream 2.0kb upstream 2964 true scaffold_2: 39834495-39837458 Theobroma cacao
Thecc1EG011390 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39835459-39837458 Theobroma cacao
Thecc1EG011390 2.0kb downstream 2.0kb downstream 2964 true scaffold_2: 39832495-39835458 Theobroma cacao
Thecc1EG011390 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39832495-39834494 Theobroma cacao
Thecc1EG011390 5.0kb upstream 5.0kb upstream 5964 true scaffold_2: 39834495-39840458 Theobroma cacao
Thecc1EG011390 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39835459-39840458 Theobroma cacao
Thecc1EG011390 5.0kb downstream 5.0kb downstream 5964 true scaffold_2: 39829495-39835458 Theobroma cacao
Thecc1EG011390 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39829495-39834494 Theobroma cacao
Thecc1EG011390 10.0kb upstream 10.0kb upstream 10964 true scaffold_2: 39834495-39845458 Theobroma cacao
Thecc1EG011390 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39835459-39845458 Theobroma cacao
Thecc1EG011390 10.0kb downstream 10.0kb downstream 10964 true scaffold_2: 39824495-39835458 Theobroma cacao
Thecc1EG011390 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39824495-39834494 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840763 5264 Brassicales-Malvales View MSA
124338284 5266 SBM View MSA
124245537 5268 Malvidae View MSA
124069862 5270 Rosid View MSA
123747742 5271 Pentapetalae View MSA
122794625 5272 Eudicot View MSA
122049154 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain