Gene : Thecc1EG011375 T. cacao v1.1
Defline:  (1 of 6) PF00646//PF07723//PF08387 - F-box domain (F-box) // Leucine Rich Repeat (LRR_2) // FBD (FBD) Genomic Order:  3166
Name:  ? Thecc1EG011375 Secondary Identifier:  ? PAC:27461922
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011375 0.5kb upstream 0.5kb upstream 3301 true scaffold_2: 39757006-39760306 Theobroma cacao
Thecc1EG011375 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39759807-39760306 Theobroma cacao
Thecc1EG011375 0.5kb downstream 0.5kb downstream 3301 true scaffold_2: 39756506-39759806 Theobroma cacao
Thecc1EG011375 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39756506-39757005 Theobroma cacao
Thecc1EG011375 1.0kb upstream 1.0kb upstream 3801 true scaffold_2: 39757006-39760806 Theobroma cacao
Thecc1EG011375 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39759807-39760806 Theobroma cacao
Thecc1EG011375 1.0kb downstream 1.0kb downstream 3801 true scaffold_2: 39756006-39759806 Theobroma cacao
Thecc1EG011375 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39756006-39757005 Theobroma cacao
Thecc1EG011375 2.0kb upstream 2.0kb upstream 4801 true scaffold_2: 39757006-39761806 Theobroma cacao
Thecc1EG011375 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39759807-39761806 Theobroma cacao
Thecc1EG011375 2.0kb downstream 2.0kb downstream 4801 true scaffold_2: 39755006-39759806 Theobroma cacao
Thecc1EG011375 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39755006-39757005 Theobroma cacao
Thecc1EG011375 5.0kb upstream 5.0kb upstream 7801 true scaffold_2: 39757006-39764806 Theobroma cacao
Thecc1EG011375 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39759807-39764806 Theobroma cacao
Thecc1EG011375 5.0kb downstream 5.0kb downstream 7801 true scaffold_2: 39752006-39759806 Theobroma cacao
Thecc1EG011375 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39752006-39757005 Theobroma cacao
Thecc1EG011375 10.0kb upstream 10.0kb upstream 12801 true scaffold_2: 39757006-39769806 Theobroma cacao
Thecc1EG011375 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39759807-39769806 Theobroma cacao
Thecc1EG011375 10.0kb downstream 10.0kb downstream 12801 true scaffold_2: 39747006-39759806 Theobroma cacao
Thecc1EG011375 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39747006-39757005 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834914 5264 Brassicales-Malvales View MSA
124336417 5266 SBM View MSA
124239003 5268 Malvidae View MSA
124071002 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain