Gene : Thecc1EG011369 T. cacao v1.1
Defline:  (1 of 1) PF03088//PF03101 - Strictosidine synthase (Str_synth) // FAR1 DNA-binding domain (FAR1) Genomic Order:  3162
Name:  ? Thecc1EG011369 Secondary Identifier:  ? PAC:27460832
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011369 0.5kb upstream 0.5kb upstream 7165 true scaffold_2: 39701425-39708589 Theobroma cacao
Thecc1EG011369 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39708090-39708589 Theobroma cacao
Thecc1EG011369 0.5kb downstream 0.5kb downstream 7165 true scaffold_2: 39700925-39708089 Theobroma cacao
Thecc1EG011369 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39700925-39701424 Theobroma cacao
Thecc1EG011369 1.0kb upstream 1.0kb upstream 7665 true scaffold_2: 39701425-39709089 Theobroma cacao
Thecc1EG011369 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39708090-39709089 Theobroma cacao
Thecc1EG011369 1.0kb downstream 1.0kb downstream 7665 true scaffold_2: 39700425-39708089 Theobroma cacao
Thecc1EG011369 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39700425-39701424 Theobroma cacao
Thecc1EG011369 2.0kb upstream 2.0kb upstream 8665 true scaffold_2: 39701425-39710089 Theobroma cacao
Thecc1EG011369 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39708090-39710089 Theobroma cacao
Thecc1EG011369 2.0kb downstream 2.0kb downstream 8665 true scaffold_2: 39699425-39708089 Theobroma cacao
Thecc1EG011369 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39699425-39701424 Theobroma cacao
Thecc1EG011369 5.0kb upstream 5.0kb upstream 11665 true scaffold_2: 39701425-39713089 Theobroma cacao
Thecc1EG011369 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39708090-39713089 Theobroma cacao
Thecc1EG011369 5.0kb downstream 5.0kb downstream 11665 true scaffold_2: 39696425-39708089 Theobroma cacao
Thecc1EG011369 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39696425-39701424 Theobroma cacao
Thecc1EG011369 10.0kb upstream 10.0kb upstream 16665 true scaffold_2: 39701425-39718089 Theobroma cacao
Thecc1EG011369 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39708090-39718089 Theobroma cacao
Thecc1EG011369 10.0kb downstream 10.0kb downstream 16665 true scaffold_2: 39691425-39708089 Theobroma cacao
Thecc1EG011369 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39691425-39701424 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825494 5264 Brassicales-Malvales View MSA
124348368 5266 SBM View MSA
124253557 5268 Malvidae View MSA
124072949 5270 Rosid View MSA
123746147 5271 Pentapetalae View MSA
122796152 5272 Eudicot View MSA
122047810 5273 Angiosperm View MSA
121350347 5274 Embryophyte View MSA
123427583 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain