Gene : Thecc1EG011316 T. cacao v1.1
Defline:  (1 of 1) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114) Genomic Order:  3116
Name:  ? Thecc1EG011316 Secondary Identifier:  ? PAC:27462494
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011316 0.5kb upstream 0.5kb upstream 4954 true scaffold_2: 39391394-39396347 Theobroma cacao
Thecc1EG011316 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39391394-39391893 Theobroma cacao
Thecc1EG011316 0.5kb downstream 0.5kb downstream 4954 true scaffold_2: 39391894-39396847 Theobroma cacao
Thecc1EG011316 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39396348-39396847 Theobroma cacao
Thecc1EG011316 1.0kb upstream 1.0kb upstream 5454 true scaffold_2: 39390894-39396347 Theobroma cacao
Thecc1EG011316 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39390894-39391893 Theobroma cacao
Thecc1EG011316 1.0kb downstream 1.0kb downstream 5454 true scaffold_2: 39391894-39397347 Theobroma cacao
Thecc1EG011316 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39396348-39397347 Theobroma cacao
Thecc1EG011316 2.0kb upstream 2.0kb upstream 6454 true scaffold_2: 39389894-39396347 Theobroma cacao
Thecc1EG011316 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39389894-39391893 Theobroma cacao
Thecc1EG011316 2.0kb downstream 2.0kb downstream 6454 true scaffold_2: 39391894-39398347 Theobroma cacao
Thecc1EG011316 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39396348-39398347 Theobroma cacao
Thecc1EG011316 5.0kb upstream 5.0kb upstream 9454 true scaffold_2: 39386894-39396347 Theobroma cacao
Thecc1EG011316 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39386894-39391893 Theobroma cacao
Thecc1EG011316 5.0kb downstream 5.0kb downstream 9454 true scaffold_2: 39391894-39401347 Theobroma cacao
Thecc1EG011316 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39396348-39401347 Theobroma cacao
Thecc1EG011316 10.0kb upstream 10.0kb upstream 14454 true scaffold_2: 39381894-39396347 Theobroma cacao
Thecc1EG011316 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39381894-39391893 Theobroma cacao
Thecc1EG011316 10.0kb downstream 10.0kb downstream 14454 true scaffold_2: 39391894-39406347 Theobroma cacao
Thecc1EG011316 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39396348-39406347 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041332 5273 Angiosperm View MSA
123840698 5264 Brassicales-Malvales View MSA
124342903 5266 SBM View MSA
124237111 5268 Malvidae View MSA
124066763 5270 Rosid View MSA
123748218 5271 Pentapetalae View MSA
122792189 5272 Eudicot View MSA
121344762 5274 Embryophyte View MSA
123425409 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain