Gene : Thecc1EG011446 T. cacao v1.1
Defline:  (1 of 1) PTHR10741//PTHR10741:SF5 - TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X // TRANSLIN-ASSOCIATED PROTEIN X Genomic Order:  3222
Name:  ? Thecc1EG011446 Secondary Identifier:  ? PAC:27464622
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011446 0.5kb upstream 0.5kb upstream 3387 true scaffold_2: 40170001-40173387 Theobroma cacao
Thecc1EG011446 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 40170001-40170500 Theobroma cacao
Thecc1EG011446 0.5kb downstream 0.5kb downstream 3387 true scaffold_2: 40170501-40173887 Theobroma cacao
Thecc1EG011446 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 40173388-40173887 Theobroma cacao
Thecc1EG011446 1.0kb upstream 1.0kb upstream 3887 true scaffold_2: 40169501-40173387 Theobroma cacao
Thecc1EG011446 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 40169501-40170500 Theobroma cacao
Thecc1EG011446 1.0kb downstream 1.0kb downstream 3887 true scaffold_2: 40170501-40174387 Theobroma cacao
Thecc1EG011446 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 40173388-40174387 Theobroma cacao
Thecc1EG011446 2.0kb upstream 2.0kb upstream 4887 true scaffold_2: 40168501-40173387 Theobroma cacao
Thecc1EG011446 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 40168501-40170500 Theobroma cacao
Thecc1EG011446 2.0kb downstream 2.0kb downstream 4887 true scaffold_2: 40170501-40175387 Theobroma cacao
Thecc1EG011446 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 40173388-40175387 Theobroma cacao
Thecc1EG011446 5.0kb upstream 5.0kb upstream 7887 true scaffold_2: 40165501-40173387 Theobroma cacao
Thecc1EG011446 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 40165501-40170500 Theobroma cacao
Thecc1EG011446 5.0kb downstream 5.0kb downstream 7887 true scaffold_2: 40170501-40178387 Theobroma cacao
Thecc1EG011446 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 40173388-40178387 Theobroma cacao
Thecc1EG011446 10.0kb upstream 10.0kb upstream 12887 true scaffold_2: 40160501-40173387 Theobroma cacao
Thecc1EG011446 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 40160501-40170500 Theobroma cacao
Thecc1EG011446 10.0kb downstream 10.0kb downstream 12887 true scaffold_2: 40170501-40183387 Theobroma cacao
Thecc1EG011446 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 40173388-40183387 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830049 5264 Brassicales-Malvales View MSA
124349785 5266 SBM View MSA
124243030 5268 Malvidae View MSA
124067948 5270 Rosid View MSA
123752005 5271 Pentapetalae View MSA
122788507 5272 Eudicot View MSA
122041771 5273 Angiosperm View MSA
121345786 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain