Gene : Thecc1EG011444 T. cacao v1.1
Defline:  (1 of 2) PTHR33914//PTHR33914:SF2 - FAMILY NOT NAMED // 18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN Genomic Order:  3220
Name:  ? Thecc1EG011444 Secondary Identifier:  ? PAC:27461520
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011444 0.5kb upstream 0.5kb upstream 5722 true scaffold_2: 40156059-40161780 Theobroma cacao
Thecc1EG011444 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 40161281-40161780 Theobroma cacao
Thecc1EG011444 0.5kb downstream 0.5kb downstream 5722 true scaffold_2: 40155559-40161280 Theobroma cacao
Thecc1EG011444 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 40155559-40156058 Theobroma cacao
Thecc1EG011444 1.0kb upstream 1.0kb upstream 6222 true scaffold_2: 40156059-40162280 Theobroma cacao
Thecc1EG011444 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 40161281-40162280 Theobroma cacao
Thecc1EG011444 1.0kb downstream 1.0kb downstream 6222 true scaffold_2: 40155059-40161280 Theobroma cacao
Thecc1EG011444 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 40155059-40156058 Theobroma cacao
Thecc1EG011444 2.0kb upstream 2.0kb upstream 7222 true scaffold_2: 40156059-40163280 Theobroma cacao
Thecc1EG011444 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 40161281-40163280 Theobroma cacao
Thecc1EG011444 2.0kb downstream 2.0kb downstream 7222 true scaffold_2: 40154059-40161280 Theobroma cacao
Thecc1EG011444 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 40154059-40156058 Theobroma cacao
Thecc1EG011444 5.0kb upstream 5.0kb upstream 10222 true scaffold_2: 40156059-40166280 Theobroma cacao
Thecc1EG011444 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 40161281-40166280 Theobroma cacao
Thecc1EG011444 5.0kb downstream 5.0kb downstream 10222 true scaffold_2: 40151059-40161280 Theobroma cacao
Thecc1EG011444 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 40151059-40156058 Theobroma cacao
Thecc1EG011444 10.0kb upstream 10.0kb upstream 15222 true scaffold_2: 40156059-40171280 Theobroma cacao
Thecc1EG011444 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 40161281-40171280 Theobroma cacao
Thecc1EG011444 10.0kb downstream 10.0kb downstream 15222 true scaffold_2: 40146059-40161280 Theobroma cacao
Thecc1EG011444 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 40146059-40156058 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836320 5264 Brassicales-Malvales View MSA
124336784 5266 SBM View MSA
124253505 5268 Malvidae View MSA
124072821 5270 Rosid View MSA
123747257 5271 Pentapetalae View MSA
122794578 5272 Eudicot View MSA
122043601 5273 Angiosperm View MSA
121349006 5274 Embryophyte View MSA
123381122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain