Gene : Thecc1EG011433 T. cacao v1.1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Genomic Order:  3210
Name:  ? Thecc1EG011433 Secondary Identifier:  ? PAC:27461567
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011433 0.5kb upstream 0.5kb upstream 4395 true scaffold_2: 40091985-40096379 Theobroma cacao
Thecc1EG011433 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 40091985-40092484 Theobroma cacao
Thecc1EG011433 0.5kb downstream 0.5kb downstream 4395 true scaffold_2: 40092485-40096879 Theobroma cacao
Thecc1EG011433 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 40096380-40096879 Theobroma cacao
Thecc1EG011433 1.0kb upstream 1.0kb upstream 4895 true scaffold_2: 40091485-40096379 Theobroma cacao
Thecc1EG011433 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 40091485-40092484 Theobroma cacao
Thecc1EG011433 1.0kb downstream 1.0kb downstream 4895 true scaffold_2: 40092485-40097379 Theobroma cacao
Thecc1EG011433 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 40096380-40097379 Theobroma cacao
Thecc1EG011433 2.0kb upstream 2.0kb upstream 5895 true scaffold_2: 40090485-40096379 Theobroma cacao
Thecc1EG011433 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 40090485-40092484 Theobroma cacao
Thecc1EG011433 2.0kb downstream 2.0kb downstream 5895 true scaffold_2: 40092485-40098379 Theobroma cacao
Thecc1EG011433 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 40096380-40098379 Theobroma cacao
Thecc1EG011433 5.0kb upstream 5.0kb upstream 8895 true scaffold_2: 40087485-40096379 Theobroma cacao
Thecc1EG011433 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 40087485-40092484 Theobroma cacao
Thecc1EG011433 5.0kb downstream 5.0kb downstream 8895 true scaffold_2: 40092485-40101379 Theobroma cacao
Thecc1EG011433 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 40096380-40101379 Theobroma cacao
Thecc1EG011433 10.0kb upstream 10.0kb upstream 13895 true scaffold_2: 40082485-40096379 Theobroma cacao
Thecc1EG011433 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 40082485-40092484 Theobroma cacao
Thecc1EG011433 10.0kb downstream 10.0kb downstream 13895 true scaffold_2: 40092485-40106379 Theobroma cacao
Thecc1EG011433 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 40096380-40106379 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840262 5264 Brassicales-Malvales View MSA
124341799 5266 SBM View MSA
124253716 5268 Malvidae View MSA
124066475 5270 Rosid View MSA
123737331 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain