Gene : Thecc1EG011697 T. cacao v1.1
Defline:  (1 of 1) PTHR12899//PTHR12899:SF8 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL // RIBOSOMAL L18P/L5E FAMILY PROTEIN Genomic Order:  3433
Name:  ? Thecc1EG011697 Secondary Identifier:  ? PAC:27461970
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011697 0.5kb upstream 0.5kb upstream 2706 true scaffold_2: 41328060-41330765 Theobroma cacao
Thecc1EG011697 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41328060-41328559 Theobroma cacao
Thecc1EG011697 0.5kb downstream 0.5kb downstream 2706 true scaffold_2: 41328560-41331265 Theobroma cacao
Thecc1EG011697 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41330766-41331265 Theobroma cacao
Thecc1EG011697 1.0kb upstream 1.0kb upstream 3206 true scaffold_2: 41327560-41330765 Theobroma cacao
Thecc1EG011697 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41327560-41328559 Theobroma cacao
Thecc1EG011697 1.0kb downstream 1.0kb downstream 3206 true scaffold_2: 41328560-41331765 Theobroma cacao
Thecc1EG011697 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41330766-41331765 Theobroma cacao
Thecc1EG011697 2.0kb upstream 2.0kb upstream 4206 true scaffold_2: 41326560-41330765 Theobroma cacao
Thecc1EG011697 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41326560-41328559 Theobroma cacao
Thecc1EG011697 2.0kb downstream 2.0kb downstream 4206 true scaffold_2: 41328560-41332765 Theobroma cacao
Thecc1EG011697 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41330766-41332765 Theobroma cacao
Thecc1EG011697 5.0kb upstream 5.0kb upstream 7206 true scaffold_2: 41323560-41330765 Theobroma cacao
Thecc1EG011697 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41323560-41328559 Theobroma cacao
Thecc1EG011697 5.0kb downstream 5.0kb downstream 7206 true scaffold_2: 41328560-41335765 Theobroma cacao
Thecc1EG011697 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41330766-41335765 Theobroma cacao
Thecc1EG011697 10.0kb upstream 10.0kb upstream 12206 true scaffold_2: 41318560-41330765 Theobroma cacao
Thecc1EG011697 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41318560-41328559 Theobroma cacao
Thecc1EG011697 10.0kb downstream 10.0kb downstream 12206 true scaffold_2: 41328560-41340765 Theobroma cacao
Thecc1EG011697 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41330766-41340765 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834841 5264 Brassicales-Malvales View MSA
124336723 5266 SBM View MSA
124240406 5268 Malvidae View MSA
124068538 5270 Rosid View MSA
123741435 5271 Pentapetalae View MSA
122786788 5272 Eudicot View MSA
122046996 5273 Angiosperm View MSA
121350781 5274 Embryophyte View MSA
123423914 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain