Gene : Thecc1EG011674 T. cacao v1.1
Defline:  (1 of 1) PTHR33399//PTHR33399:SF5 - FAMILY NOT NAMED // PSBQ-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  3416
Name:  ? Thecc1EG011674 Secondary Identifier:  ? PAC:27460098
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011674 0.5kb upstream 0.5kb upstream 1705 true scaffold_2: 41242857-41244561 Theobroma cacao
Thecc1EG011674 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41242857-41243356 Theobroma cacao
Thecc1EG011674 0.5kb downstream 0.5kb downstream 1705 true scaffold_2: 41243357-41245061 Theobroma cacao
Thecc1EG011674 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41244562-41245061 Theobroma cacao
Thecc1EG011674 1.0kb upstream 1.0kb upstream 2205 true scaffold_2: 41242357-41244561 Theobroma cacao
Thecc1EG011674 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41242357-41243356 Theobroma cacao
Thecc1EG011674 1.0kb downstream 1.0kb downstream 2205 true scaffold_2: 41243357-41245561 Theobroma cacao
Thecc1EG011674 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41244562-41245561 Theobroma cacao
Thecc1EG011674 2.0kb upstream 2.0kb upstream 3205 true scaffold_2: 41241357-41244561 Theobroma cacao
Thecc1EG011674 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41241357-41243356 Theobroma cacao
Thecc1EG011674 2.0kb downstream 2.0kb downstream 3205 true scaffold_2: 41243357-41246561 Theobroma cacao
Thecc1EG011674 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41244562-41246561 Theobroma cacao
Thecc1EG011674 5.0kb upstream 5.0kb upstream 6205 true scaffold_2: 41238357-41244561 Theobroma cacao
Thecc1EG011674 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41238357-41243356 Theobroma cacao
Thecc1EG011674 5.0kb downstream 5.0kb downstream 6205 true scaffold_2: 41243357-41249561 Theobroma cacao
Thecc1EG011674 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41244562-41249561 Theobroma cacao
Thecc1EG011674 10.0kb upstream 10.0kb upstream 11205 true scaffold_2: 41233357-41244561 Theobroma cacao
Thecc1EG011674 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41233357-41243356 Theobroma cacao
Thecc1EG011674 10.0kb downstream 10.0kb downstream 11205 true scaffold_2: 41243357-41254561 Theobroma cacao
Thecc1EG011674 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41244562-41254561 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841629 5264 Brassicales-Malvales View MSA
124351392 5266 SBM View MSA
124240408 5268 Malvidae View MSA
124061087 5270 Rosid View MSA
123739021 5271 Pentapetalae View MSA
122786264 5272 Eudicot View MSA
122043406 5273 Angiosperm View MSA
121310117 5274 Embryophyte View MSA
123347693 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain