Gene : Thecc1EG011659 T. cacao v1.1

Defline:  (1 of 4) PTHR10641//PTHR10641:SF546 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Genomic Order:  3404
Name:  ? Thecc1EG011659 Secondary Identifier:  ? PAC:27464490

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011659 0.5kb upstream 0.5kb upstream 3020 true scaffold_2: 41158743-41161762 Theobroma cacao
Thecc1EG011659 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41161263-41161762 Theobroma cacao
Thecc1EG011659 0.5kb downstream 0.5kb downstream 3020 true scaffold_2: 41158243-41161262 Theobroma cacao
Thecc1EG011659 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41158243-41158742 Theobroma cacao
Thecc1EG011659 1.0kb upstream 1.0kb upstream 3520 true scaffold_2: 41158743-41162262 Theobroma cacao
Thecc1EG011659 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41161263-41162262 Theobroma cacao
Thecc1EG011659 1.0kb downstream 1.0kb downstream 3520 true scaffold_2: 41157743-41161262 Theobroma cacao
Thecc1EG011659 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41157743-41158742 Theobroma cacao
Thecc1EG011659 2.0kb upstream 2.0kb upstream 4520 true scaffold_2: 41158743-41163262 Theobroma cacao
Thecc1EG011659 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41161263-41163262 Theobroma cacao
Thecc1EG011659 2.0kb downstream 2.0kb downstream 4520 true scaffold_2: 41156743-41161262 Theobroma cacao
Thecc1EG011659 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41156743-41158742 Theobroma cacao
Thecc1EG011659 5.0kb upstream 5.0kb upstream 7520 true scaffold_2: 41158743-41166262 Theobroma cacao
Thecc1EG011659 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41161263-41166262 Theobroma cacao
Thecc1EG011659 5.0kb downstream 5.0kb downstream 7520 true scaffold_2: 41153743-41161262 Theobroma cacao
Thecc1EG011659 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41153743-41158742 Theobroma cacao
Thecc1EG011659 10.0kb upstream 10.0kb upstream 12520 true scaffold_2: 41158743-41171262 Theobroma cacao
Thecc1EG011659 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41161263-41171262 Theobroma cacao
Thecc1EG011659 10.0kb downstream 10.0kb downstream 12520 true scaffold_2: 41148743-41161262 Theobroma cacao
Thecc1EG011659 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41148743-41158742 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825304 5264 Brassicales-Malvales View MSA
124349000 5266 SBM View MSA
124253432 5268 Malvidae View MSA
124074821 5270 Rosid View MSA
123740178 5271 Pentapetalae View MSA
122794867 5272 Eudicot View MSA
122048623 5273 Angiosperm View MSA
121349225 5274 Embryophyte View MSA
123381223 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain