Gene : Thecc1EG011586 T. cacao v1.1
Defline:  (1 of 1) PTHR14363//PTHR14363:SF13 - HEPARANASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3339
Name:  ? Thecc1EG011586 Secondary Identifier:  ? PAC:27459889
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7213 Theobroma cacao pathologic  
Tcacao PWY-7214 Theobroma cacao pathologic  
Tcacao PWY-7445 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011586 0.5kb upstream 0.5kb upstream 3417 true scaffold_2: 40838471-40841887 Theobroma cacao
Thecc1EG011586 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 40838471-40838970 Theobroma cacao
Thecc1EG011586 0.5kb downstream 0.5kb downstream 3417 true scaffold_2: 40838971-40842387 Theobroma cacao
Thecc1EG011586 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 40841888-40842387 Theobroma cacao
Thecc1EG011586 1.0kb upstream 1.0kb upstream 3917 true scaffold_2: 40837971-40841887 Theobroma cacao
Thecc1EG011586 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 40837971-40838970 Theobroma cacao
Thecc1EG011586 1.0kb downstream 1.0kb downstream 3917 true scaffold_2: 40838971-40842887 Theobroma cacao
Thecc1EG011586 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 40841888-40842887 Theobroma cacao
Thecc1EG011586 2.0kb upstream 2.0kb upstream 4917 true scaffold_2: 40836971-40841887 Theobroma cacao
Thecc1EG011586 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 40836971-40838970 Theobroma cacao
Thecc1EG011586 2.0kb downstream 2.0kb downstream 4917 true scaffold_2: 40838971-40843887 Theobroma cacao
Thecc1EG011586 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 40841888-40843887 Theobroma cacao
Thecc1EG011586 5.0kb upstream 5.0kb upstream 7917 true scaffold_2: 40833971-40841887 Theobroma cacao
Thecc1EG011586 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 40833971-40838970 Theobroma cacao
Thecc1EG011586 5.0kb downstream 5.0kb downstream 7917 true scaffold_2: 40838971-40846887 Theobroma cacao
Thecc1EG011586 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 40841888-40846887 Theobroma cacao
Thecc1EG011586 10.0kb upstream 10.0kb upstream 12917 true scaffold_2: 40828971-40841887 Theobroma cacao
Thecc1EG011586 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 40828971-40838970 Theobroma cacao
Thecc1EG011586 10.0kb downstream 10.0kb downstream 12917 true scaffold_2: 40838971-40851887 Theobroma cacao
Thecc1EG011586 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 40841888-40851887 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826265 5264 Brassicales-Malvales View MSA
124347218 5266 SBM View MSA
124245373 5268 Malvidae View MSA
124070666 5270 Rosid View MSA
123745187 5271 Pentapetalae View MSA
122795641 5272 Eudicot View MSA
122049598 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain