Gene : Thecc1EG011571 T. cacao v1.1
Defline:  (1 of 2) PTHR10353//PTHR10353:SF26 - GLYCOSYL HYDROLASE // BETA-GLUCOSIDASE 40 Genomic Order:  3324
Name:  ? Thecc1EG011571 Secondary Identifier:  ? PAC:27460447
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5176 Theobroma cacao pathologic  
Tcacao PWY-7089 Theobroma cacao pathologic  
Tcacao PWY-7091 Theobroma cacao pathologic  
Tcacao PWY-7092 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011571 0.5kb upstream 0.5kb upstream 5622 true scaffold_2: 40762412-40768033 Theobroma cacao
Thecc1EG011571 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 40762412-40762911 Theobroma cacao
Thecc1EG011571 0.5kb downstream 0.5kb downstream 5622 true scaffold_2: 40762912-40768533 Theobroma cacao
Thecc1EG011571 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 40768034-40768533 Theobroma cacao
Thecc1EG011571 1.0kb upstream 1.0kb upstream 6122 true scaffold_2: 40761912-40768033 Theobroma cacao
Thecc1EG011571 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 40761912-40762911 Theobroma cacao
Thecc1EG011571 1.0kb downstream 1.0kb downstream 6122 true scaffold_2: 40762912-40769033 Theobroma cacao
Thecc1EG011571 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 40768034-40769033 Theobroma cacao
Thecc1EG011571 2.0kb upstream 2.0kb upstream 7122 true scaffold_2: 40760912-40768033 Theobroma cacao
Thecc1EG011571 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 40760912-40762911 Theobroma cacao
Thecc1EG011571 2.0kb downstream 2.0kb downstream 7122 true scaffold_2: 40762912-40770033 Theobroma cacao
Thecc1EG011571 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 40768034-40770033 Theobroma cacao
Thecc1EG011571 5.0kb upstream 5.0kb upstream 10122 true scaffold_2: 40757912-40768033 Theobroma cacao
Thecc1EG011571 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 40757912-40762911 Theobroma cacao
Thecc1EG011571 5.0kb downstream 5.0kb downstream 10122 true scaffold_2: 40762912-40773033 Theobroma cacao
Thecc1EG011571 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 40768034-40773033 Theobroma cacao
Thecc1EG011571 10.0kb upstream 10.0kb upstream 15122 true scaffold_2: 40752912-40768033 Theobroma cacao
Thecc1EG011571 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 40752912-40762911 Theobroma cacao
Thecc1EG011571 10.0kb downstream 10.0kb downstream 15122 true scaffold_2: 40762912-40778033 Theobroma cacao
Thecc1EG011571 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 40768034-40778033 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830578 5264 Brassicales-Malvales View MSA
124337182 5266 SBM View MSA
124238647 5268 Malvidae View MSA
124061874 5270 Rosid View MSA
123738262 5271 Pentapetalae View MSA
122793131 5272 Eudicot View MSA
122050283 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain