Gene : Thecc1EG011799 T. cacao v1.1
Defline:  (1 of 1) PTHR10357:SF171 - ALPHA-AMYLASE 3, CHLOROPLASTIC Genomic Order:  3526
Name:  ? Thecc1EG011799 Secondary Identifier:  ? PAC:27460343
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011799 0.5kb upstream 0.5kb upstream 10172 true scaffold_2: 41796096-41806267 Theobroma cacao
Thecc1EG011799 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41805768-41806267 Theobroma cacao
Thecc1EG011799 0.5kb downstream 0.5kb downstream 10172 true scaffold_2: 41795596-41805767 Theobroma cacao
Thecc1EG011799 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41795596-41796095 Theobroma cacao
Thecc1EG011799 1.0kb upstream 1.0kb upstream 10672 true scaffold_2: 41796096-41806767 Theobroma cacao
Thecc1EG011799 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41805768-41806767 Theobroma cacao
Thecc1EG011799 1.0kb downstream 1.0kb downstream 10672 true scaffold_2: 41795096-41805767 Theobroma cacao
Thecc1EG011799 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41795096-41796095 Theobroma cacao
Thecc1EG011799 2.0kb upstream 2.0kb upstream 11672 true scaffold_2: 41796096-41807767 Theobroma cacao
Thecc1EG011799 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41805768-41807767 Theobroma cacao
Thecc1EG011799 2.0kb downstream 2.0kb downstream 11672 true scaffold_2: 41794096-41805767 Theobroma cacao
Thecc1EG011799 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41794096-41796095 Theobroma cacao
Thecc1EG011799 5.0kb upstream 5.0kb upstream 14672 true scaffold_2: 41796096-41810767 Theobroma cacao
Thecc1EG011799 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41805768-41810767 Theobroma cacao
Thecc1EG011799 5.0kb downstream 5.0kb downstream 14672 true scaffold_2: 41791096-41805767 Theobroma cacao
Thecc1EG011799 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41791096-41796095 Theobroma cacao
Thecc1EG011799 10.0kb upstream 10.0kb upstream 19672 true scaffold_2: 41796096-41815767 Theobroma cacao
Thecc1EG011799 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41805768-41815767 Theobroma cacao
Thecc1EG011799 10.0kb downstream 10.0kb downstream 19672 true scaffold_2: 41786096-41805767 Theobroma cacao
Thecc1EG011799 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41786096-41796095 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041096 5273 Angiosperm View MSA
123830540 5264 Brassicales-Malvales View MSA
124338703 5266 SBM View MSA
124243652 5268 Malvidae View MSA
124067208 5270 Rosid View MSA
123738092 5271 Pentapetalae View MSA
122789264 5272 Eudicot View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain