Gene : Thecc1EG011786 T. cacao v1.1
Defline:  (1 of 1) PF01011//PF13360 - PQQ enzyme repeat (PQQ) // PQQ-like domain (PQQ_2) Genomic Order:  3512
Name:  ? Thecc1EG011786 Secondary Identifier:  ? PAC:27461840
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6464 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011786 0.5kb upstream 0.5kb upstream 4256 true scaffold_2: 41726900-41731155 Theobroma cacao
Thecc1EG011786 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41726900-41727399 Theobroma cacao
Thecc1EG011786 0.5kb downstream 0.5kb downstream 4256 true scaffold_2: 41727400-41731655 Theobroma cacao
Thecc1EG011786 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41731156-41731655 Theobroma cacao
Thecc1EG011786 1.0kb upstream 1.0kb upstream 4756 true scaffold_2: 41726400-41731155 Theobroma cacao
Thecc1EG011786 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41726400-41727399 Theobroma cacao
Thecc1EG011786 1.0kb downstream 1.0kb downstream 4756 true scaffold_2: 41727400-41732155 Theobroma cacao
Thecc1EG011786 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41731156-41732155 Theobroma cacao
Thecc1EG011786 2.0kb upstream 2.0kb upstream 5756 true scaffold_2: 41725400-41731155 Theobroma cacao
Thecc1EG011786 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41725400-41727399 Theobroma cacao
Thecc1EG011786 2.0kb downstream 2.0kb downstream 5756 true scaffold_2: 41727400-41733155 Theobroma cacao
Thecc1EG011786 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41731156-41733155 Theobroma cacao
Thecc1EG011786 5.0kb upstream 5.0kb upstream 8756 true scaffold_2: 41722400-41731155 Theobroma cacao
Thecc1EG011786 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41722400-41727399 Theobroma cacao
Thecc1EG011786 5.0kb downstream 5.0kb downstream 8756 true scaffold_2: 41727400-41736155 Theobroma cacao
Thecc1EG011786 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41731156-41736155 Theobroma cacao
Thecc1EG011786 10.0kb upstream 10.0kb upstream 13756 true scaffold_2: 41717400-41731155 Theobroma cacao
Thecc1EG011786 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41717400-41727399 Theobroma cacao
Thecc1EG011786 10.0kb downstream 10.0kb downstream 13756 true scaffold_2: 41727400-41741155 Theobroma cacao
Thecc1EG011786 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41731156-41741155 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792221 5273 Angiosperm View MSA
123827268 5264 Brassicales-Malvales View MSA
124351506 5266 SBM View MSA
124253892 5268 Malvidae View MSA
124071700 5270 Rosid View MSA
123753626 5271 Pentapetalae View MSA
122797018 5272 Eudicot View MSA
121349158 5274 Embryophyte View MSA
123425868 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain