Gene : Thecc1EG011772 T. cacao v1.1
Defline:  (1 of 4) K18467 - vacuolar protein sorting-associated protein 29 (VPS29) Genomic Order:  3499
Name:  ? Thecc1EG011772 Secondary Identifier:  ? PAC:27463319
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011772 0.5kb upstream 0.5kb upstream 3511 true scaffold_2: 41663082-41666592 Theobroma cacao
Thecc1EG011772 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41666093-41666592 Theobroma cacao
Thecc1EG011772 0.5kb downstream 0.5kb downstream 3511 true scaffold_2: 41662582-41666092 Theobroma cacao
Thecc1EG011772 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41662582-41663081 Theobroma cacao
Thecc1EG011772 1.0kb upstream 1.0kb upstream 4011 true scaffold_2: 41663082-41667092 Theobroma cacao
Thecc1EG011772 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41666093-41667092 Theobroma cacao
Thecc1EG011772 1.0kb downstream 1.0kb downstream 4011 true scaffold_2: 41662082-41666092 Theobroma cacao
Thecc1EG011772 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41662082-41663081 Theobroma cacao
Thecc1EG011772 2.0kb upstream 2.0kb upstream 5011 true scaffold_2: 41663082-41668092 Theobroma cacao
Thecc1EG011772 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41666093-41668092 Theobroma cacao
Thecc1EG011772 2.0kb downstream 2.0kb downstream 5011 true scaffold_2: 41661082-41666092 Theobroma cacao
Thecc1EG011772 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41661082-41663081 Theobroma cacao
Thecc1EG011772 5.0kb upstream 5.0kb upstream 8011 true scaffold_2: 41663082-41671092 Theobroma cacao
Thecc1EG011772 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41666093-41671092 Theobroma cacao
Thecc1EG011772 5.0kb downstream 5.0kb downstream 8011 true scaffold_2: 41658082-41666092 Theobroma cacao
Thecc1EG011772 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41658082-41663081 Theobroma cacao
Thecc1EG011772 10.0kb upstream 10.0kb upstream 13011 true scaffold_2: 41663082-41676092 Theobroma cacao
Thecc1EG011772 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41666093-41676092 Theobroma cacao
Thecc1EG011772 10.0kb downstream 10.0kb downstream 13011 true scaffold_2: 41653082-41666092 Theobroma cacao
Thecc1EG011772 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41653082-41663081 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835756 5264 Brassicales-Malvales View MSA
124348903 5266 SBM View MSA
124250664 5268 Malvidae View MSA
124071774 5270 Rosid View MSA
123736460 5271 Pentapetalae View MSA
122787236 5272 Eudicot View MSA
122043646 5273 Angiosperm View MSA
121346806 5274 Embryophyte View MSA
123424212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain