Gene : Thecc1EG011730 T. cacao v1.1
Defline:  (1 of 58) PTHR22763 - RING ZINC FINGER PROTEIN Genomic Order:  3463
Name:  ? Thecc1EG011730 Secondary Identifier:  ? PAC:27460449
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011730 0.5kb upstream 0.5kb upstream 1839 true scaffold_2: 41475698-41477536 Theobroma cacao
Thecc1EG011730 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41475698-41476197 Theobroma cacao
Thecc1EG011730 0.5kb downstream 0.5kb downstream 1839 true scaffold_2: 41476198-41478036 Theobroma cacao
Thecc1EG011730 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41477537-41478036 Theobroma cacao
Thecc1EG011730 1.0kb upstream 1.0kb upstream 2339 true scaffold_2: 41475198-41477536 Theobroma cacao
Thecc1EG011730 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41475198-41476197 Theobroma cacao
Thecc1EG011730 1.0kb downstream 1.0kb downstream 2339 true scaffold_2: 41476198-41478536 Theobroma cacao
Thecc1EG011730 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41477537-41478536 Theobroma cacao
Thecc1EG011730 2.0kb upstream 2.0kb upstream 3339 true scaffold_2: 41474198-41477536 Theobroma cacao
Thecc1EG011730 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41474198-41476197 Theobroma cacao
Thecc1EG011730 2.0kb downstream 2.0kb downstream 3339 true scaffold_2: 41476198-41479536 Theobroma cacao
Thecc1EG011730 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41477537-41479536 Theobroma cacao
Thecc1EG011730 5.0kb upstream 5.0kb upstream 6339 true scaffold_2: 41471198-41477536 Theobroma cacao
Thecc1EG011730 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41471198-41476197 Theobroma cacao
Thecc1EG011730 5.0kb downstream 5.0kb downstream 6339 true scaffold_2: 41476198-41482536 Theobroma cacao
Thecc1EG011730 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41477537-41482536 Theobroma cacao
Thecc1EG011730 10.0kb upstream 10.0kb upstream 11339 true scaffold_2: 41466198-41477536 Theobroma cacao
Thecc1EG011730 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41466198-41476197 Theobroma cacao
Thecc1EG011730 10.0kb downstream 10.0kb downstream 11339 true scaffold_2: 41476198-41487536 Theobroma cacao
Thecc1EG011730 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41477537-41487536 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837858 5264 Brassicales-Malvales View MSA
124347162 5266 SBM View MSA
124254220 5268 Malvidae View MSA
124074172 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain