Gene : Thecc1EG011713 T. cacao v1.1
Defline:  (1 of 1) PTHR31576:SF2 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B Genomic Order:  3448
Name:  ? Thecc1EG011713 Secondary Identifier:  ? PAC:27464106
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011713 0.5kb upstream 0.5kb upstream 5457 true scaffold_2: 41396270-41401726 Theobroma cacao
Thecc1EG011713 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41401227-41401726 Theobroma cacao
Thecc1EG011713 0.5kb downstream 0.5kb downstream 5457 true scaffold_2: 41395770-41401226 Theobroma cacao
Thecc1EG011713 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41395770-41396269 Theobroma cacao
Thecc1EG011713 1.0kb upstream 1.0kb upstream 5957 true scaffold_2: 41396270-41402226 Theobroma cacao
Thecc1EG011713 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41401227-41402226 Theobroma cacao
Thecc1EG011713 1.0kb downstream 1.0kb downstream 5957 true scaffold_2: 41395270-41401226 Theobroma cacao
Thecc1EG011713 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41395270-41396269 Theobroma cacao
Thecc1EG011713 2.0kb upstream 2.0kb upstream 6957 true scaffold_2: 41396270-41403226 Theobroma cacao
Thecc1EG011713 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41401227-41403226 Theobroma cacao
Thecc1EG011713 2.0kb downstream 2.0kb downstream 6957 true scaffold_2: 41394270-41401226 Theobroma cacao
Thecc1EG011713 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41394270-41396269 Theobroma cacao
Thecc1EG011713 5.0kb upstream 5.0kb upstream 9957 true scaffold_2: 41396270-41406226 Theobroma cacao
Thecc1EG011713 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41401227-41406226 Theobroma cacao
Thecc1EG011713 5.0kb downstream 5.0kb downstream 9957 true scaffold_2: 41391270-41401226 Theobroma cacao
Thecc1EG011713 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41391270-41396269 Theobroma cacao
Thecc1EG011713 10.0kb upstream 10.0kb upstream 14957 true scaffold_2: 41396270-41411226 Theobroma cacao
Thecc1EG011713 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41401227-41411226 Theobroma cacao
Thecc1EG011713 10.0kb downstream 10.0kb downstream 14957 true scaffold_2: 41386270-41401226 Theobroma cacao
Thecc1EG011713 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41386270-41396269 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829708 5264 Brassicales-Malvales View MSA
124338977 5266 SBM View MSA
124244133 5268 Malvidae View MSA
124065937 5270 Rosid View MSA
123742102 5271 Pentapetalae View MSA
122796533 5272 Eudicot View MSA
122050673 5273 Angiosperm View MSA
121345414 5274 Embryophyte View MSA
123427215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain