Gene : Thecc1EG011707 T. cacao v1.1
Defline:  (1 of 3) PTHR22950//PTHR22950:SF246 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  3442
Name:  ? Thecc1EG011707 Secondary Identifier:  ? PAC:27462410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011707 0.5kb upstream 0.5kb upstream 2270 true scaffold_2: 41369617-41371886 Theobroma cacao
Thecc1EG011707 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41371387-41371886 Theobroma cacao
Thecc1EG011707 0.5kb downstream 0.5kb downstream 2270 true scaffold_2: 41369117-41371386 Theobroma cacao
Thecc1EG011707 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41369117-41369616 Theobroma cacao
Thecc1EG011707 1.0kb upstream 1.0kb upstream 2770 true scaffold_2: 41369617-41372386 Theobroma cacao
Thecc1EG011707 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41371387-41372386 Theobroma cacao
Thecc1EG011707 1.0kb downstream 1.0kb downstream 2770 true scaffold_2: 41368617-41371386 Theobroma cacao
Thecc1EG011707 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41368617-41369616 Theobroma cacao
Thecc1EG011707 2.0kb upstream 2.0kb upstream 3770 true scaffold_2: 41369617-41373386 Theobroma cacao
Thecc1EG011707 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41371387-41373386 Theobroma cacao
Thecc1EG011707 2.0kb downstream 2.0kb downstream 3770 true scaffold_2: 41367617-41371386 Theobroma cacao
Thecc1EG011707 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41367617-41369616 Theobroma cacao
Thecc1EG011707 5.0kb upstream 5.0kb upstream 6770 true scaffold_2: 41369617-41376386 Theobroma cacao
Thecc1EG011707 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41371387-41376386 Theobroma cacao
Thecc1EG011707 5.0kb downstream 5.0kb downstream 6770 true scaffold_2: 41364617-41371386 Theobroma cacao
Thecc1EG011707 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41364617-41369616 Theobroma cacao
Thecc1EG011707 10.0kb upstream 10.0kb upstream 11770 true scaffold_2: 41369617-41381386 Theobroma cacao
Thecc1EG011707 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41371387-41381386 Theobroma cacao
Thecc1EG011707 10.0kb downstream 10.0kb downstream 11770 true scaffold_2: 41359617-41371386 Theobroma cacao
Thecc1EG011707 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41359617-41369616 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123817373 5264 Brassicales-Malvales Singleton cluster - no MSA
124313728 5266 SBM Singleton cluster - no MSA
124248266 5268 Malvidae View MSA
124074784 5270 Rosid View MSA
123745911 5271 Pentapetalae View MSA
122771696 5272 Eudicot View MSA
122050905 5273 Angiosperm View MSA
121349854 5274 Embryophyte View MSA
123381472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain