Gene : Thecc1EG011705 T. cacao v1.1
Defline:  (1 of 3) PTHR22950//PTHR22950:SF246 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  3440
Name:  ? Thecc1EG011705 Secondary Identifier:  ? PAC:27464991
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011705 0.5kb upstream 0.5kb upstream 10845 true scaffold_2: 41360868-41371712 Theobroma cacao
Thecc1EG011705 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41371213-41371712 Theobroma cacao
Thecc1EG011705 0.5kb downstream 0.5kb downstream 10845 true scaffold_2: 41360368-41371212 Theobroma cacao
Thecc1EG011705 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41360368-41360867 Theobroma cacao
Thecc1EG011705 1.0kb upstream 1.0kb upstream 11345 true scaffold_2: 41360868-41372212 Theobroma cacao
Thecc1EG011705 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41371213-41372212 Theobroma cacao
Thecc1EG011705 1.0kb downstream 1.0kb downstream 11345 true scaffold_2: 41359868-41371212 Theobroma cacao
Thecc1EG011705 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41359868-41360867 Theobroma cacao
Thecc1EG011705 2.0kb upstream 2.0kb upstream 12345 true scaffold_2: 41360868-41373212 Theobroma cacao
Thecc1EG011705 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41371213-41373212 Theobroma cacao
Thecc1EG011705 2.0kb downstream 2.0kb downstream 12345 true scaffold_2: 41358868-41371212 Theobroma cacao
Thecc1EG011705 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41358868-41360867 Theobroma cacao
Thecc1EG011705 5.0kb upstream 5.0kb upstream 15345 true scaffold_2: 41360868-41376212 Theobroma cacao
Thecc1EG011705 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41371213-41376212 Theobroma cacao
Thecc1EG011705 5.0kb downstream 5.0kb downstream 15345 true scaffold_2: 41355868-41371212 Theobroma cacao
Thecc1EG011705 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41355868-41360867 Theobroma cacao
Thecc1EG011705 10.0kb upstream 10.0kb upstream 20345 true scaffold_2: 41360868-41381212 Theobroma cacao
Thecc1EG011705 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41371213-41381212 Theobroma cacao
Thecc1EG011705 10.0kb downstream 10.0kb downstream 20345 true scaffold_2: 41350868-41371212 Theobroma cacao
Thecc1EG011705 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41350868-41360867 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
123824219 5264 Brassicales-Malvales View MSA
124348257 5266 SBM View MSA
124245883 5268 Malvidae View MSA
124070612 5270 Rosid View MSA
123742441 5271 Pentapetalae View MSA
122795032 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain