Gene : Thecc1EG011912 T. cacao v1.1
Defline:  Uncharacterized protein Genomic Order:  3630
Name:  ? Thecc1EG011912 Secondary Identifier:  ? PAC:27462648
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011912 0.5kb upstream 0.5kb upstream 11008 true scaffold_2: 42335046-42346053 Theobroma cacao
Thecc1EG011912 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42345554-42346053 Theobroma cacao
Thecc1EG011912 0.5kb downstream 0.5kb downstream 11008 true scaffold_2: 42334546-42345553 Theobroma cacao
Thecc1EG011912 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42334546-42335045 Theobroma cacao
Thecc1EG011912 1.0kb upstream 1.0kb upstream 11508 true scaffold_2: 42335046-42346553 Theobroma cacao
Thecc1EG011912 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42345554-42346553 Theobroma cacao
Thecc1EG011912 1.0kb downstream 1.0kb downstream 11508 true scaffold_2: 42334046-42345553 Theobroma cacao
Thecc1EG011912 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42334046-42335045 Theobroma cacao
Thecc1EG011912 2.0kb upstream 2.0kb upstream 12508 true scaffold_2: 42335046-42347553 Theobroma cacao
Thecc1EG011912 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42345554-42347553 Theobroma cacao
Thecc1EG011912 2.0kb downstream 2.0kb downstream 12508 true scaffold_2: 42333046-42345553 Theobroma cacao
Thecc1EG011912 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42333046-42335045 Theobroma cacao
Thecc1EG011912 5.0kb upstream 5.0kb upstream 15508 true scaffold_2: 42335046-42350553 Theobroma cacao
Thecc1EG011912 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42345554-42350553 Theobroma cacao
Thecc1EG011912 5.0kb downstream 5.0kb downstream 15508 true scaffold_2: 42330046-42345553 Theobroma cacao
Thecc1EG011912 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42330046-42335045 Theobroma cacao
Thecc1EG011912 10.0kb upstream 10.0kb upstream 20508 true scaffold_2: 42335046-42355553 Theobroma cacao
Thecc1EG011912 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42345554-42355553 Theobroma cacao
Thecc1EG011912 10.0kb downstream 10.0kb downstream 20508 true scaffold_2: 42325046-42345553 Theobroma cacao
Thecc1EG011912 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42325046-42335045 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781717 5273 Angiosperm View MSA
123817409 5264 Brassicales-Malvales Singleton cluster - no MSA
124313763 5266 SBM Singleton cluster - no MSA
124248463 5268 Malvidae View MSA
124071812 5270 Rosid View MSA
123750415 5271 Pentapetalae View MSA
122773644 5272 Eudicot View MSA
121053284 5274 Embryophyte View MSA
123093310 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain