Gene : Thecc1EG011898 T. cacao v1.1
Defline:  (1 of 1) PTHR20922:SF17 - F24J5.3 Genomic Order:  3617
Name:  ? Thecc1EG011898 Secondary Identifier:  ? PAC:27462336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011898 0.5kb upstream 0.5kb upstream 3195 true scaffold_2: 42273300-42276494 Theobroma cacao
Thecc1EG011898 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42273300-42273799 Theobroma cacao
Thecc1EG011898 0.5kb downstream 0.5kb downstream 3195 true scaffold_2: 42273800-42276994 Theobroma cacao
Thecc1EG011898 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42276495-42276994 Theobroma cacao
Thecc1EG011898 1.0kb upstream 1.0kb upstream 3695 true scaffold_2: 42272800-42276494 Theobroma cacao
Thecc1EG011898 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42272800-42273799 Theobroma cacao
Thecc1EG011898 1.0kb downstream 1.0kb downstream 3695 true scaffold_2: 42273800-42277494 Theobroma cacao
Thecc1EG011898 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42276495-42277494 Theobroma cacao
Thecc1EG011898 2.0kb upstream 2.0kb upstream 4695 true scaffold_2: 42271800-42276494 Theobroma cacao
Thecc1EG011898 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42271800-42273799 Theobroma cacao
Thecc1EG011898 2.0kb downstream 2.0kb downstream 4695 true scaffold_2: 42273800-42278494 Theobroma cacao
Thecc1EG011898 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42276495-42278494 Theobroma cacao
Thecc1EG011898 5.0kb upstream 5.0kb upstream 7695 true scaffold_2: 42268800-42276494 Theobroma cacao
Thecc1EG011898 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42268800-42273799 Theobroma cacao
Thecc1EG011898 5.0kb downstream 5.0kb downstream 7695 true scaffold_2: 42273800-42281494 Theobroma cacao
Thecc1EG011898 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42276495-42281494 Theobroma cacao
Thecc1EG011898 10.0kb upstream 10.0kb upstream 12695 true scaffold_2: 42263800-42276494 Theobroma cacao
Thecc1EG011898 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42263800-42273799 Theobroma cacao
Thecc1EG011898 10.0kb downstream 10.0kb downstream 12695 true scaffold_2: 42273800-42286494 Theobroma cacao
Thecc1EG011898 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42276495-42286494 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832584 5264 Brassicales-Malvales View MSA
124346643 5266 SBM View MSA
124238453 5268 Malvidae View MSA
124068181 5270 Rosid View MSA
123747456 5271 Pentapetalae View MSA
122796355 5272 Eudicot View MSA
122048491 5273 Angiosperm View MSA
121349693 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain