Gene : Thecc1EG011892 T. cacao v1.1
Defline:  (1 of 1) PTHR30523//PTHR30523:SF6 - PHOSPHOENOLPYRUVATE CARBOXYLASE // PHOSPHOENOLPYRUVATE CARBOXYLASE 4 Genomic Order:  3611
Name:  ? Thecc1EG011892 Secondary Identifier:  ? PAC:27463203
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-241 Theobroma cacao pathologic  
Tcacao PWY-6549 Theobroma cacao pathologic  
Tcacao PWY-7115 Theobroma cacao pathologic  
Tcacao PWY-7117 Theobroma cacao pathologic  
Tcacao PWYQT-4429 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011892 0.5kb upstream 0.5kb upstream 13387 true scaffold_2: 42227201-42240587 Theobroma cacao
Thecc1EG011892 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42227201-42227700 Theobroma cacao
Thecc1EG011892 0.5kb downstream 0.5kb downstream 13387 true scaffold_2: 42227701-42241087 Theobroma cacao
Thecc1EG011892 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42240588-42241087 Theobroma cacao
Thecc1EG011892 1.0kb upstream 1.0kb upstream 13887 true scaffold_2: 42226701-42240587 Theobroma cacao
Thecc1EG011892 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42226701-42227700 Theobroma cacao
Thecc1EG011892 1.0kb downstream 1.0kb downstream 13887 true scaffold_2: 42227701-42241587 Theobroma cacao
Thecc1EG011892 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42240588-42241587 Theobroma cacao
Thecc1EG011892 2.0kb upstream 2.0kb upstream 14887 true scaffold_2: 42225701-42240587 Theobroma cacao
Thecc1EG011892 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42225701-42227700 Theobroma cacao
Thecc1EG011892 2.0kb downstream 2.0kb downstream 14887 true scaffold_2: 42227701-42242587 Theobroma cacao
Thecc1EG011892 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42240588-42242587 Theobroma cacao
Thecc1EG011892 5.0kb upstream 5.0kb upstream 17887 true scaffold_2: 42222701-42240587 Theobroma cacao
Thecc1EG011892 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42222701-42227700 Theobroma cacao
Thecc1EG011892 5.0kb downstream 5.0kb downstream 17887 true scaffold_2: 42227701-42245587 Theobroma cacao
Thecc1EG011892 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42240588-42245587 Theobroma cacao
Thecc1EG011892 10.0kb upstream 10.0kb upstream 22887 true scaffold_2: 42217701-42240587 Theobroma cacao
Thecc1EG011892 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42217701-42227700 Theobroma cacao
Thecc1EG011892 10.0kb downstream 10.0kb downstream 22887 true scaffold_2: 42227701-42250587 Theobroma cacao
Thecc1EG011892 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42240588-42250587 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836867 5264 Brassicales-Malvales View MSA
124343843 5266 SBM View MSA
124239165 5268 Malvidae View MSA
124063566 5270 Rosid View MSA
123739033 5271 Pentapetalae View MSA
122792339 5272 Eudicot View MSA
122047821 5273 Angiosperm View MSA
123429064 5275 Viridiplantae View MSA
121344816 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain