Gene : Thecc1EG011880 T. cacao v1.1
Defline:  (1 of 2) PTHR31342:SF7 - PROTEIN CHUP1, CHLOROPLASTIC Genomic Order:  3600
Name:  ? Thecc1EG011880 Secondary Identifier:  ? PAC:27464694
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011880 0.5kb upstream 0.5kb upstream 9689 true scaffold_2: 42166851-42176539 Theobroma cacao
Thecc1EG011880 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42176040-42176539 Theobroma cacao
Thecc1EG011880 0.5kb downstream 0.5kb downstream 9689 true scaffold_2: 42166351-42176039 Theobroma cacao
Thecc1EG011880 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42166351-42166850 Theobroma cacao
Thecc1EG011880 1.0kb upstream 1.0kb upstream 10189 true scaffold_2: 42166851-42177039 Theobroma cacao
Thecc1EG011880 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42176040-42177039 Theobroma cacao
Thecc1EG011880 1.0kb downstream 1.0kb downstream 10189 true scaffold_2: 42165851-42176039 Theobroma cacao
Thecc1EG011880 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42165851-42166850 Theobroma cacao
Thecc1EG011880 2.0kb upstream 2.0kb upstream 11189 true scaffold_2: 42166851-42178039 Theobroma cacao
Thecc1EG011880 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42176040-42178039 Theobroma cacao
Thecc1EG011880 2.0kb downstream 2.0kb downstream 11189 true scaffold_2: 42164851-42176039 Theobroma cacao
Thecc1EG011880 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42164851-42166850 Theobroma cacao
Thecc1EG011880 5.0kb upstream 5.0kb upstream 14189 true scaffold_2: 42166851-42181039 Theobroma cacao
Thecc1EG011880 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42176040-42181039 Theobroma cacao
Thecc1EG011880 5.0kb downstream 5.0kb downstream 14189 true scaffold_2: 42161851-42176039 Theobroma cacao
Thecc1EG011880 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42161851-42166850 Theobroma cacao
Thecc1EG011880 10.0kb upstream 10.0kb upstream 19189 true scaffold_2: 42166851-42186039 Theobroma cacao
Thecc1EG011880 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42176040-42186039 Theobroma cacao
Thecc1EG011880 10.0kb downstream 10.0kb downstream 19189 true scaffold_2: 42156851-42176039 Theobroma cacao
Thecc1EG011880 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42156851-42166850 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830328 5264 Brassicales-Malvales View MSA
124343939 5266 SBM View MSA
124249766 5268 Malvidae View MSA
124062330 5270 Rosid View MSA
123739628 5271 Pentapetalae View MSA
122790649 5272 Eudicot View MSA
122047771 5273 Angiosperm View MSA
121348939 5274 Embryophyte View MSA
123381088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain