Gene : Thecc1EG011881 T. cacao v1.1
Defline:  (1 of 1) PF00395 - S-layer homology domain (SLH) Genomic Order:  3601
Name:  ? Thecc1EG011881 Secondary Identifier:  ? PAC:27463576
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011881 0.5kb upstream 0.5kb upstream 4767 true scaffold_2: 42176089-42180855 Theobroma cacao
Thecc1EG011881 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42180356-42180855 Theobroma cacao
Thecc1EG011881 0.5kb downstream 0.5kb downstream 4767 true scaffold_2: 42175589-42180355 Theobroma cacao
Thecc1EG011881 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42175589-42176088 Theobroma cacao
Thecc1EG011881 1.0kb upstream 1.0kb upstream 5267 true scaffold_2: 42176089-42181355 Theobroma cacao
Thecc1EG011881 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42180356-42181355 Theobroma cacao
Thecc1EG011881 1.0kb downstream 1.0kb downstream 5267 true scaffold_2: 42175089-42180355 Theobroma cacao
Thecc1EG011881 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42175089-42176088 Theobroma cacao
Thecc1EG011881 2.0kb upstream 2.0kb upstream 6267 true scaffold_2: 42176089-42182355 Theobroma cacao
Thecc1EG011881 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42180356-42182355 Theobroma cacao
Thecc1EG011881 2.0kb downstream 2.0kb downstream 6267 true scaffold_2: 42174089-42180355 Theobroma cacao
Thecc1EG011881 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42174089-42176088 Theobroma cacao
Thecc1EG011881 5.0kb upstream 5.0kb upstream 9267 true scaffold_2: 42176089-42185355 Theobroma cacao
Thecc1EG011881 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42180356-42185355 Theobroma cacao
Thecc1EG011881 5.0kb downstream 5.0kb downstream 9267 true scaffold_2: 42171089-42180355 Theobroma cacao
Thecc1EG011881 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42171089-42176088 Theobroma cacao
Thecc1EG011881 10.0kb upstream 10.0kb upstream 14267 true scaffold_2: 42176089-42190355 Theobroma cacao
Thecc1EG011881 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42180356-42190355 Theobroma cacao
Thecc1EG011881 10.0kb downstream 10.0kb downstream 14267 true scaffold_2: 42166089-42180355 Theobroma cacao
Thecc1EG011881 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42166089-42176088 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041383 5273 Angiosperm View MSA
123828970 5264 Brassicales-Malvales View MSA
124339584 5266 SBM View MSA
124237285 5268 Malvidae View MSA
124066424 5270 Rosid View MSA
123737499 5271 Pentapetalae View MSA
122793809 5272 Eudicot View MSA
121350545 5274 Embryophyte View MSA
123381784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain