Gene : Thecc1EG011859 T. cacao v1.1
Defline:  (1 of 3) 5.3.99.6 - Allene-oxide cyclase Genomic Order:  3580
Name:  ? Thecc1EG011859 Secondary Identifier:  ? PAC:27459882
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-735 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011859 0.5kb upstream 0.5kb upstream 1756 true scaffold_2: 42059713-42061468 Theobroma cacao
Thecc1EG011859 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42060969-42061468 Theobroma cacao
Thecc1EG011859 0.5kb downstream 0.5kb downstream 1756 true scaffold_2: 42059213-42060968 Theobroma cacao
Thecc1EG011859 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42059213-42059712 Theobroma cacao
Thecc1EG011859 1.0kb upstream 1.0kb upstream 2256 true scaffold_2: 42059713-42061968 Theobroma cacao
Thecc1EG011859 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42060969-42061968 Theobroma cacao
Thecc1EG011859 1.0kb downstream 1.0kb downstream 2256 true scaffold_2: 42058713-42060968 Theobroma cacao
Thecc1EG011859 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42058713-42059712 Theobroma cacao
Thecc1EG011859 2.0kb upstream 2.0kb upstream 3256 true scaffold_2: 42059713-42062968 Theobroma cacao
Thecc1EG011859 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42060969-42062968 Theobroma cacao
Thecc1EG011859 2.0kb downstream 2.0kb downstream 3256 true scaffold_2: 42057713-42060968 Theobroma cacao
Thecc1EG011859 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42057713-42059712 Theobroma cacao
Thecc1EG011859 5.0kb upstream 5.0kb upstream 6256 true scaffold_2: 42059713-42065968 Theobroma cacao
Thecc1EG011859 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42060969-42065968 Theobroma cacao
Thecc1EG011859 5.0kb downstream 5.0kb downstream 6256 true scaffold_2: 42054713-42060968 Theobroma cacao
Thecc1EG011859 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42054713-42059712 Theobroma cacao
Thecc1EG011859 10.0kb upstream 10.0kb upstream 11256 true scaffold_2: 42059713-42070968 Theobroma cacao
Thecc1EG011859 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42060969-42070968 Theobroma cacao
Thecc1EG011859 10.0kb downstream 10.0kb downstream 11256 true scaffold_2: 42049713-42060968 Theobroma cacao
Thecc1EG011859 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42049713-42059712 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828498 5264 Brassicales-Malvales View MSA
124339249 5266 SBM View MSA
124252758 5268 Malvidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain