Gene : Thecc1EG011850 T. cacao v1.1
Defline:  (1 of 4) PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Genomic Order:  3571
Name:  ? Thecc1EG011850 Secondary Identifier:  ? PAC:27463010
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011850 0.5kb upstream 0.5kb upstream 6177 true scaffold_2: 42010486-42016662 Theobroma cacao
Thecc1EG011850 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42010486-42010985 Theobroma cacao
Thecc1EG011850 0.5kb downstream 0.5kb downstream 6177 true scaffold_2: 42010986-42017162 Theobroma cacao
Thecc1EG011850 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42016663-42017162 Theobroma cacao
Thecc1EG011850 1.0kb upstream 1.0kb upstream 6677 true scaffold_2: 42009986-42016662 Theobroma cacao
Thecc1EG011850 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42009986-42010985 Theobroma cacao
Thecc1EG011850 1.0kb downstream 1.0kb downstream 6677 true scaffold_2: 42010986-42017662 Theobroma cacao
Thecc1EG011850 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42016663-42017662 Theobroma cacao
Thecc1EG011850 2.0kb upstream 2.0kb upstream 7677 true scaffold_2: 42008986-42016662 Theobroma cacao
Thecc1EG011850 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42008986-42010985 Theobroma cacao
Thecc1EG011850 2.0kb downstream 2.0kb downstream 7677 true scaffold_2: 42010986-42018662 Theobroma cacao
Thecc1EG011850 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42016663-42018662 Theobroma cacao
Thecc1EG011850 5.0kb upstream 5.0kb upstream 10677 true scaffold_2: 42005986-42016662 Theobroma cacao
Thecc1EG011850 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42005986-42010985 Theobroma cacao
Thecc1EG011850 5.0kb downstream 5.0kb downstream 10677 true scaffold_2: 42010986-42021662 Theobroma cacao
Thecc1EG011850 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42016663-42021662 Theobroma cacao
Thecc1EG011850 10.0kb upstream 10.0kb upstream 15677 true scaffold_2: 42000986-42016662 Theobroma cacao
Thecc1EG011850 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42000986-42010985 Theobroma cacao
Thecc1EG011850 10.0kb downstream 10.0kb downstream 15677 true scaffold_2: 42010986-42026662 Theobroma cacao
Thecc1EG011850 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42016663-42026662 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832499 5264 Brassicales-Malvales View MSA
124345020 5266 SBM View MSA
124245050 5268 Malvidae View MSA
124060465 5270 Rosid View MSA
123745262 5271 Pentapetalae View MSA
122786171 5272 Eudicot View MSA
122046225 5273 Angiosperm View MSA
121344721 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain