Gene : Thecc1EG011848 T. cacao v1.1
Defline:  (1 of 1) PTHR12385:SF36 - PLASMA-MEMBRANE CHOLINE TRANSPORTER-LIKE PROTEIN Genomic Order:  3569
Name:  ? Thecc1EG011848 Secondary Identifier:  ? PAC:27462109
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011848 0.5kb upstream 0.5kb upstream 6185 true scaffold_2: 42000167-42006351 Theobroma cacao
Thecc1EG011848 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42005852-42006351 Theobroma cacao
Thecc1EG011848 0.5kb downstream 0.5kb downstream 6185 true scaffold_2: 41999667-42005851 Theobroma cacao
Thecc1EG011848 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41999667-42000166 Theobroma cacao
Thecc1EG011848 1.0kb upstream 1.0kb upstream 6685 true scaffold_2: 42000167-42006851 Theobroma cacao
Thecc1EG011848 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42005852-42006851 Theobroma cacao
Thecc1EG011848 1.0kb downstream 1.0kb downstream 6685 true scaffold_2: 41999167-42005851 Theobroma cacao
Thecc1EG011848 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41999167-42000166 Theobroma cacao
Thecc1EG011848 2.0kb upstream 2.0kb upstream 7685 true scaffold_2: 42000167-42007851 Theobroma cacao
Thecc1EG011848 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42005852-42007851 Theobroma cacao
Thecc1EG011848 2.0kb downstream 2.0kb downstream 7685 true scaffold_2: 41998167-42005851 Theobroma cacao
Thecc1EG011848 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41998167-42000166 Theobroma cacao
Thecc1EG011848 5.0kb upstream 5.0kb upstream 10685 true scaffold_2: 42000167-42010851 Theobroma cacao
Thecc1EG011848 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42005852-42010851 Theobroma cacao
Thecc1EG011848 5.0kb downstream 5.0kb downstream 10685 true scaffold_2: 41995167-42005851 Theobroma cacao
Thecc1EG011848 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41995167-42000166 Theobroma cacao
Thecc1EG011848 10.0kb upstream 10.0kb upstream 15685 true scaffold_2: 42000167-42015851 Theobroma cacao
Thecc1EG011848 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42005852-42015851 Theobroma cacao
Thecc1EG011848 10.0kb downstream 10.0kb downstream 15685 true scaffold_2: 41990167-42005851 Theobroma cacao
Thecc1EG011848 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41990167-42000166 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830547 5264 Brassicales-Malvales View MSA
124342538 5266 SBM View MSA
124236825 5268 Malvidae View MSA
124063041 5270 Rosid View MSA
123736673 5271 Pentapetalae View MSA
122792379 5272 Eudicot View MSA
122042832 5273 Angiosperm View MSA
121344178 5274 Embryophyte View MSA
123428325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain