Gene : Thecc1EG011837 T. cacao v1.1

Defline:  (1 of 2) PTHR31086:SF20 - ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED Genomic Order:  3560
Name:  ? Thecc1EG011837 Secondary Identifier:  ? PAC:27463979

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011837 0.5kb upstream 0.5kb upstream 5372 true scaffold_2: 41959980-41965351 Theobroma cacao
Thecc1EG011837 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41959980-41960479 Theobroma cacao
Thecc1EG011837 0.5kb downstream 0.5kb downstream 5372 true scaffold_2: 41960480-41965851 Theobroma cacao
Thecc1EG011837 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41965352-41965851 Theobroma cacao
Thecc1EG011837 1.0kb upstream 1.0kb upstream 5872 true scaffold_2: 41959480-41965351 Theobroma cacao
Thecc1EG011837 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41959480-41960479 Theobroma cacao
Thecc1EG011837 1.0kb downstream 1.0kb downstream 5872 true scaffold_2: 41960480-41966351 Theobroma cacao
Thecc1EG011837 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41965352-41966351 Theobroma cacao
Thecc1EG011837 2.0kb upstream 2.0kb upstream 6872 true scaffold_2: 41958480-41965351 Theobroma cacao
Thecc1EG011837 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41958480-41960479 Theobroma cacao
Thecc1EG011837 2.0kb downstream 2.0kb downstream 6872 true scaffold_2: 41960480-41967351 Theobroma cacao
Thecc1EG011837 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41965352-41967351 Theobroma cacao
Thecc1EG011837 5.0kb upstream 5.0kb upstream 9872 true scaffold_2: 41955480-41965351 Theobroma cacao
Thecc1EG011837 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41955480-41960479 Theobroma cacao
Thecc1EG011837 5.0kb downstream 5.0kb downstream 9872 true scaffold_2: 41960480-41970351 Theobroma cacao
Thecc1EG011837 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41965352-41970351 Theobroma cacao
Thecc1EG011837 10.0kb upstream 10.0kb upstream 14872 true scaffold_2: 41950480-41965351 Theobroma cacao
Thecc1EG011837 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41950480-41960479 Theobroma cacao
Thecc1EG011837 10.0kb downstream 10.0kb downstream 14872 true scaffold_2: 41960480-41975351 Theobroma cacao
Thecc1EG011837 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41965352-41975351 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840567 5264 Brassicales-Malvales View MSA
124345088 5266 SBM View MSA
124239976 5268 Malvidae View MSA
124050283 5270 Rosid View MSA
123751150 5271 Pentapetalae View MSA
122792195 5272 Eudicot View MSA
122047214 5273 Angiosperm View MSA
121351604 5274 Embryophyte View MSA
123428514 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain