Gene : Thecc1EG012012 T. cacao v1.1
Defline:  (1 of 1) PTHR12297 - HYPOXIA-INDUCBILE GENE 1 HIG1 -RELATED Genomic Order:  69
Name:  ? Thecc1EG012012 Secondary Identifier:  ? PAC:27447022
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012012 0.5kb upstream 0.5kb upstream 2958 true scaffold_3: 447476-450433 Theobroma cacao
Thecc1EG012012 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 447476-447975 Theobroma cacao
Thecc1EG012012 0.5kb downstream 0.5kb downstream 2958 true scaffold_3: 447976-450933 Theobroma cacao
Thecc1EG012012 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 450434-450933 Theobroma cacao
Thecc1EG012012 1.0kb upstream 1.0kb upstream 3458 true scaffold_3: 446976-450433 Theobroma cacao
Thecc1EG012012 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 446976-447975 Theobroma cacao
Thecc1EG012012 1.0kb downstream 1.0kb downstream 3458 true scaffold_3: 447976-451433 Theobroma cacao
Thecc1EG012012 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 450434-451433 Theobroma cacao
Thecc1EG012012 2.0kb upstream 2.0kb upstream 4458 true scaffold_3: 445976-450433 Theobroma cacao
Thecc1EG012012 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 445976-447975 Theobroma cacao
Thecc1EG012012 2.0kb downstream 2.0kb downstream 4458 true scaffold_3: 447976-452433 Theobroma cacao
Thecc1EG012012 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 450434-452433 Theobroma cacao
Thecc1EG012012 5.0kb upstream 5.0kb upstream 7458 true scaffold_3: 442976-450433 Theobroma cacao
Thecc1EG012012 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 442976-447975 Theobroma cacao
Thecc1EG012012 5.0kb downstream 5.0kb downstream 7458 true scaffold_3: 447976-455433 Theobroma cacao
Thecc1EG012012 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 450434-455433 Theobroma cacao
Thecc1EG012012 10.0kb upstream 10.0kb upstream 12458 true scaffold_3: 437976-450433 Theobroma cacao
Thecc1EG012012 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 437976-447975 Theobroma cacao
Thecc1EG012012 10.0kb downstream 10.0kb downstream 12458 true scaffold_3: 447976-460433 Theobroma cacao
Thecc1EG012012 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 450434-460433 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833689 5264 Brassicales-Malvales View MSA
124339417 5266 SBM View MSA
124239233 5268 Malvidae View MSA
124069964 5270 Rosid View MSA
123750302 5271 Pentapetalae View MSA
122790917 5272 Eudicot View MSA
122045148 5273 Angiosperm View MSA
121347874 5274 Embryophyte View MSA
123423754 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain